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L3_058_000M1_scaffold_2361

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000M1_scaffold_2361_1
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(64..969)
DNA (906bp) protein (302aa)
Oxidoreductase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GV88_9FIRM
Oxidoreductase {ECO:0000313|EMBL:CDB25191.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
oxidoreductase
L3_058_000M1_scaffold_2361_2
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1062..2150)
DNA (1089bp) protein (363aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
serC; phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HGQ3_9FIRM
L3_058_000M1_scaffold_2361_3
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2578..3993
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GIB5_9FIRM
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
magnesium transporter
L3_058_000M1_scaffold_2361_4
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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4184..5434
DNA (1251bp) protein (417aa)
Putative voltage-gated chloride channel n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DDX6_9FIRM
Putative voltage-gated chloride channel {ECO:0000313|EMBL:CCX75047.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
putative voltage-gated chloride channel
L3_058_000M1_scaffold_2361_5
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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5534..6298
DNA (765bp) protein (255aa)
ABC-type antimicrobial peptide transport system ATPase component n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GV92_9FIRM
ABC-type antimicrobial peptide transport system ATPase component {ECO:0000313|EMBL:CDB25196.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
antimicrobial peptide ABC transporter ATPase
L3_058_000M1_scaffold_2361_6
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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6295..8292
DNA (1998bp) protein (666aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J3D8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY43531.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
lysophospholipase L1 biosynthesis ABC transporter permease
L3_058_000M1_scaffold_2361_7
unknown

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8292..8414
DNA (123bp) protein (41aa)

This feature has no annotations

L3_058_000M1_scaffold_2361_8
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8656..10209)
DNA (1554bp) protein (518aa)
cls; cardiolipin synthase (EC:2.7.8.-)
Cardiolipin synthase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GL85_9FIRM
Cardiolipin synthase {ECO:0000313|EMBL:CDB25200.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_058_000M1_scaffold_2361_9
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10401..11852)
DNA (1452bp) protein (484aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
pncB; nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GV95_9FIRM
L3_058_000M1_scaffold_2361_10
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11947..12846)
DNA (900bp) protein (300aa)
Beta-lactamase domain protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HGR4_9FIRM
Beta-lactamase domain protein {ECO:0000313|EMBL:CDB25202.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
beta-lactamase domain protein
L3_058_000M1_scaffold_2361_11
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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13157..13876
DNA (720bp) protein (240aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
pyrH; uridylate kinase (EC:2.7.4.22)
Uridylate kinase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GIC2_9FIRM
L3_058_000M1_scaffold_2361_12
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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13880..14437
DNA (558bp) protein (186aa)
Ribosome-recycling factor n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GTZ9_9FIRM
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
frr; ribosome recycling factor
L3_058_000M1_scaffold_2361_13
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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14437..15192
DNA (756bp) protein (252aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
uppS; undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GL89_9FIRM
L3_058_000M1_scaffold_2361_14
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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15206..16018
DNA (813bp) protein (271aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Phosphatidate cytidylyltransferase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GPA3_9FIRM
cdsA; phosphatidate cytidylyltransferase
L3_058_000M1_scaffold_2361_15
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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16041..17198
DNA (1158bp) protein (386aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GZW4_9FIRM
L3_058_000M1_scaffold_2361_16
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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17195..18256
DNA (1062bp) protein (354aa)
putative M50B family peptidase (EC:3.4.24.-)
Putative M50B family peptidase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GS47_9FIRM
Putative M50B family peptidase {ECO:0000313|EMBL:CDB27275.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_058_000M1_scaffold_2361_17
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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18336..19373
DNA (1038bp) protein (346aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
ispG; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.4.3)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H1A1_9FIRM
L3_058_000M1_scaffold_2361_18
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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19387..23331
DNA (3945bp) protein (1315aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
polC; PolC-type DNA polymerase I (EC:2.7.7.7)
DNA polymerase III polC-type n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HMX5_9FIRM
L3_058_000M1_scaffold_2361_19
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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23328..23879
DNA (552bp) protein (184aa)
Phosphopantetheinyl transferase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GPA7_9FIRM
Phosphopantetheinyl transferase {ECO:0000313|EMBL:CDB27278.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Phosphopantetheinyl transferase
L3_058_000M1_scaffold_2361_20
unknown

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23866..24351
DNA (486bp) protein (162aa)

This feature has no annotations

L3_058_000M1_scaffold_2361_21
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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24457..25134
DNA (678bp) protein (226aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GV68_9FIRM
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CDB25166.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
N-acetylmuramoyl-L-alanine amidase
Displaying 21 items

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