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L3_058_000M1_scaffold_22

Search features with annotation key words

Displaying items 1-30 of 241 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000M1_scaffold_22_1
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1029)
DNA (1029bp) protein (343aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
DNA topoisomerase n=1 Tax=Clostridium clostridioforme 90A1 RepID=N9Y9K3_9CLOT
topB-2; DNA topoisomerase III
L3_058_000M1_scaffold_22_2
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1026..1217)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CPD3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI71097.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
L3_058_000M1_scaffold_22_3
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1201..3198)
DNA (1998bp) protein (666aa)
Bacteriocin n=6 Tax=Enterococcus faecalis RepID=S0PAI4_ENTFA
Predicted protein {ECO:0000313|EMBL:EEU68004.1}; TaxID=565645 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis Merz96.;"
hypothetical protein
L3_058_000M1_scaffold_22_4
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3170..3436)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AYZ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI71099.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L3_058_000M1_scaffold_22_5
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3449..5176)
DNA (1728bp) protein (576aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A1 RepID=N9ZV55_9CLOT
NlpC/P60 family protein {ECO:0000313|EMBL:ERI71102.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
peptidase, M23/M37 family
L3_058_000M1_scaffold_22_6
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5188..7518)
DNA (2331bp) protein (777aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A1 RepID=N9Y9R0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI71104.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
traE protein
L3_058_000M1_scaffold_22_7
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7481..7972)
DNA (492bp) protein (164aa)
Tat pathway signal sequence domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BFY4_9CLOT
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:ERI71105.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L3_058_000M1_scaffold_22_8
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7996..8865)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CV06_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI71106.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L3_058_000M1_scaffold_22_9
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8923..9123)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A1 RepID=N9ZJD1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI71107.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L3_058_000M1_scaffold_22_10
unknown

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comp(9120..9389)
DNA (270bp) protein (90aa)

This feature has no annotations

L3_058_000M1_scaffold_22_11
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9495..11279)
DNA (1785bp) protein (595aa)
TraG/TraD family protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BGV4_9CLOT
TraG/TraD family protein {ECO:0000313|EMBL:ERI71108.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
TraG family protein
L3_058_000M1_scaffold_22_12
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11276..11758)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A1 RepID=N9Y9R3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI71109.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L3_058_000M1_scaffold_22_13
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11868..12221)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BFZ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI71110.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L3_058_000M1_scaffold_22_14
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12397..13299)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A1 RepID=N9ZWB5_9CLOT
Replication initiator protein A {ECO:0000313|EMBL:ERI71111.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L3_058_000M1_scaffold_22_15
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(13403..13651)
DNA (249bp) protein (83aa)
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6ZBP6_9FIRM
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:CDD27902.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
L3_058_000M1_scaffold_22_16
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13684..14958)
DNA (1275bp) protein (425aa)
putative RNA methyltransferase (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HMT0_9FIRM
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:CDB27227.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_058_000M1_scaffold_22_17
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15040..16644)
DNA (1605bp) protein (535aa)
Ribonuclease n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H158_9FIRM
Ribonuclease {ECO:0000313|EMBL:CDB27226.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
ribonuclease
L3_058_000M1_scaffold_22_18
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17007..18815
DNA (1809bp) protein (603aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Elongation factor 4 n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HN50_9FIRM
lepA; GTP-binding protein LepA
L3_058_000M1_scaffold_22_19
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18833..19168
DNA (336bp) protein (112aa)
CsaA protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H1H5_9FIRM
CsaA protein {ECO:0000313|EMBL:CDB27336.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
csaA; csaA protein
L3_058_000M1_scaffold_22_20
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19186..19704
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GSB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27335.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_058_000M1_scaffold_22_21
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19734..20249
DNA (516bp) protein (172aa)
GCN5-related N-acetyltransferase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H035_9FIRM
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CDB27334.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
N-acetyltransferase GCN5
L3_058_000M1_scaffold_22_22
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20259..21164
DNA (906bp) protein (302aa)
GTPase Era n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GPG2_9FIRM
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
era; GTP-binding protein Era
L3_058_000M1_scaffold_22_23
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21519..22286
DNA (768bp) protein (256aa)
DNA repair protein RecO n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H1G9_9FIRM
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
recO; DNA repair protein RecO
L3_058_000M1_scaffold_22_24
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22279..24660
DNA (2382bp) protein (794aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Endonuclease MutS2 n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GSA6_9FIRM
mutS2; MutS2 protein
L3_058_000M1_scaffold_22_25
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24833..25096
DNA (264bp) protein (88aa)
HPr-like protein Crh n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H032_9FIRM
HPr-like protein Crh {ECO:0000313|EMBL:CDB27329.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
crh; HPr-like protein Crh
L3_058_000M1_scaffold_22_26
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25158..27212)
DNA (2055bp) protein (685aa)
recG; ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GNI3_9FIRM
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:CDB25965.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_058_000M1_scaffold_22_27
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27232..27696)
DNA (465bp) protein (155aa)
folA; dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HIZ3_9FIRM
Dihydrofolate reductase {ECO:0000313|EMBL:CDB25967.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_058_000M1_scaffold_22_28
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27693..28385)
DNA (693bp) protein (231aa)
tRNA (Guanine-N(1)-)-methyltransferase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GNI8_9FIRM
tRNA (Guanine-N(1)-)-methyltransferase {ECO:0000313|EMBL:CDB25970.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
tRNA (guanine-N1)-methyltransferase
L3_058_000M1_scaffold_22_29
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28512..30344
DNA (1833bp) protein (611aa)
UvrABC system protein C n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HIZ8_9FIRM
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
uvrC; UvrABC system protein C
L3_058_000M1_scaffold_22_30
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30341..31306
DNA (966bp) protein (322aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Pyruvate kinase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GW97_9FIRM
Pyruvate kinase
Displaying items 1-30 of 241 in total

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