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L3_058_000M1_scaffold_685

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000M1_scaffold_685_1
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..298)
DNA (297bp) protein (99aa)
TatD family hydrolase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HP59_9FIRM
TatD family hydrolase {ECO:0000313|EMBL:CDB27692.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative deoxyribonuclease
L3_058_000M1_scaffold_685_2
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(309..605)
DNA (297bp) protein (99aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GQK4_9FIRM
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:CDB27693.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_058_000M1_scaffold_685_3
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(619..1467)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H159_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27694.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_058_000M1_scaffold_685_4
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(1471..2763)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D9X2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73642.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_058_000M1_scaffold_685_5
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2804..3652)
DNA (849bp) protein (283aa)
holB; putative DNA polymerase III subunit delta' (EC:2.7.7.7)
Putative DNA polymerase III subunit delta n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GTE4_9FIRM
Putative DNA polymerase III subunit delta {ECO:0000313|EMBL:CDB27695.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_058_000M1_scaffold_685_6
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

3909..6542
DNA (2634bp) protein (878aa)
pyruvate, phosphate dikinase (EC:2.7.9.1)
Pyruvate phosphate dikinase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D0C4_9FIRM
Pyruvate phosphate dikinase {ECO:0000313|EMBL:CCX73640.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L3_058_000M1_scaffold_685_7
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7182..7478
DNA (297bp) protein (99aa)
DNA methylase n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4LD02_RUMC1
DNA methylase
DNA methylase {ECO:0000313|EMBL:CBL17497.1}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
L3_058_000M1_scaffold_685_8
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7478..7681
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 2_2_44A RepID=G1VUY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX72625.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
Domain of unknown function DUF87.
L3_058_000M1_scaffold_685_9
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

7809..9020
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EJW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97629.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L3_058_000M1_scaffold_685_10
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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9087..9533
DNA (447bp) protein (149aa)
Sortase SrtB family n=1 Tax=Dorea formicigenerans CAG:28 RepID=R6SH09_9FIRM
Sortase SrtB family {ECO:0000313|EMBL:CDC59240.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
sortase, SrtB family
L3_058_000M1_scaffold_685_11
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9475..10191
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GLH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26333.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_058_000M1_scaffold_685_12
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10360..11559)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GQI7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26690.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative flavoprotein
L3_058_000M1_scaffold_685_13
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11673..12218)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HL48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26687.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_058_000M1_scaffold_685_14
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12237..12773)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GMK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26688.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_058_000M1_scaffold_685_15
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12792..13349)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GY82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26689.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_058_000M1_scaffold_685_16
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13571..15325
DNA (1755bp) protein (585aa)
ABC transporter ATP-binding protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GY78_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDB26684.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
ABC-type multidrug transport system, ATPase and permease components
L3_058_000M1_scaffold_685_17
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15420..16451)
DNA (1032bp) protein (344aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
gap; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GXM4_9FIRM
L3_058_000M1_scaffold_685_18
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16765..17349)
DNA (585bp) protein (195aa)
HDIG domain protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GZM6_9FIRM
HDIG domain protein {ECO:0000313|EMBL:CDB27164.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_058_000M1_scaffold_685_19
Eggerthella sp. CAG:1427, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17407..17940)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Eggerthella sp. CAG:1427 RepID=R5FZP7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCY05676.1}; TaxID=1262874 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:1427.;"
hypothetical protein
L3_058_000M1_scaffold_685_20
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17996..18979)
DNA (984bp) protein (328aa)
Auxin Efflux Carrier n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GXK2_9FIRM
Auxin Efflux Carrier {ECO:0000313|EMBL:CDB25961.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Transporter, auxin efflux carrier (AEC) family protein
L3_058_000M1_scaffold_685_21
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

19238..19903
DNA (666bp) protein (222aa)
TIGR02453 family protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CWZ1_9FIRM
TIGR02453 family protein {ECO:0000313|EMBL:CCX72410.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_058_000M1_scaffold_685_22
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20067..20321
DNA (255bp) protein (85aa)
Preprotein translocase SecG subunit n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HI83_9FIRM
Preprotein translocase SecG subunit {ECO:0000313|EMBL:CDB25707.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
secG; preprotein translocase SecG subunit
L3_058_000M1_scaffold_685_23
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20383..21483
DNA (1101bp) protein (367aa)
Galactokinase (EC:2.7.1.6)
GHMP kinase N-terminal domain protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GVH2_9FIRM
GHMP kinase N-terminal domain protein {ECO:0000313|EMBL:CDB25709.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_058_000M1_scaffold_685_24
unknown

Not on your lists

comp(21525..21758)
DNA (234bp) protein (78aa)

This feature has no annotations

L3_058_000M1_scaffold_685_25
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21987..22883)
DNA (897bp) protein (299aa)
dgkB; diacylglycerol kinase (EC:2.7.1.107)
Diacylglycerol kinase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GWQ7_9FIRM
Diacylglycerol kinase {ECO:0000313|EMBL:CDB25711.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_058_000M1_scaffold_685_26
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23079..23819
DNA (741bp) protein (247aa)
Putative iron-sulfur cluster assembly protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HL37_9FIRM
Putative iron-sulfur cluster assembly protein {ECO:0000313|EMBL:CDB26672.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative iron-sulfur cluster assembly protein
L3_058_000M1_scaffold_685_27
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23816..24745
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GZM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26671.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_058_000M1_scaffold_685_28
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25504..26091
DNA (588bp) protein (196aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
lexA; LexA repressor (EC:3.4.21.88)
LexA repressor n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GMP9_9FIRM
L3_058_000M1_scaffold_685_29
unknown

Not on your lists

comp(26110..26313)
DNA (204bp) protein (68aa)

This feature has no annotations

L3_058_000M1_scaffold_685_30
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26387..27835
DNA (1449bp) protein (483aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GJN9_9FIRM
Displaying items 1-30 of 38 in total

View Taxonomy