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L3_058_047G1_scaffold_61

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_047G1_scaffold_61_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..111)
DNA (111bp) protein (37aa)
ABC transporter, ATP-binding protein n=8 Tax=Clostridium perfringens RepID=H7CRS0_CLOPF
ABC transporter
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT71272.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_058_047G1_scaffold_61_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(636..833)
DNA (198bp) protein (66aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1BEL4_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS81746.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L3_058_047G1_scaffold_61_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1009..1251)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BS79_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT15439.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_058_047G1_scaffold_61_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1244..2257)
DNA (1014bp) protein (338aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Sensor histidine kinase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SWP5_CLOPS
sensor histidine kinase
L3_058_047G1_scaffold_61_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2248..2934)
DNA (687bp) protein (229aa)
Two-component response regulator n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XP46_CLOPE
two-component response regulator
Two-component response regulator {ECO:0000313|EMBL:BAB79825.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_058_047G1_scaffold_61_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3106..3330)
DNA (225bp) protein (75aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CRR1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15488.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_058_047G1_scaffold_61_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3612..3839)
DNA (228bp) protein (76aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CRR0_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT27373.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_058_047G1_scaffold_61_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3986..5542)
DNA (1557bp) protein (519aa)
Conserved domain protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RSK8_CLOPF
Conserved domain protein {ECO:0000313|EMBL:EDT22369.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
L3_058_047G1_scaffold_61_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5984..6235
DNA (252bp) protein (84aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CRQ8_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18652.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_058_047G1_scaffold_61_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6341..7762
DNA (1422bp) protein (474aa)
Thiamine biosynthesis protein ThiH n=2 Tax=Clostridium perfringens RepID=H7CRQ7_CLOPF
Thiamine biosynthesis protein ThiH {ECO:0000313|EMBL:EIA18651.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
thiH; thiamine biosynthesis protein ThiH
L3_058_047G1_scaffold_61_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8412..8696
DNA (285bp) protein (95aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CRQ6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15471.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_058_047G1_scaffold_61_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9439..10788
DNA (1350bp) protein (450aa)
Probaqble GTP-binding protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XP57_CLOPE
GTP-binding protein
Probaqble GTP-binding protein {ECO:0000313|EMBL:BAB79814.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_058_047G1_scaffold_61_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10929..11801)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XP58_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79813.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_058_047G1_scaffold_61_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11913..12653)
DNA (741bp) protein (247aa)
Putative membrane protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TUX5_CLOP1
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDS81766.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_058_047G1_scaffold_61_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12861..13301)
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TUX6_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79811.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_058_047G1_scaffold_61_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13420..14598)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CRQ1_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA18645.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L3_058_047G1_scaffold_61_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15221..16174
DNA (954bp) protein (318aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
ldh; L-lactate dehydrogenase (EC:1.1.1.27)
L-lactate dehydrogenase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V4I7_CLOPF
L3_058_047G1_scaffold_61_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16571..16843)
DNA (273bp) protein (91aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=B1BEN3_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT13643.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_058_047G1_scaffold_61_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17120..18553)
DNA (1434bp) protein (478aa)
Drug resistance transporter, EmrB/QacA family n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BXD2_CLOPF
Drug resistance transporter, EmrB/QacA family {ECO:0000313|EMBL:EDT13626.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
EmrB/QacA family drug resistance transporter
L3_058_047G1_scaffold_61_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18913..20661)
DNA (1749bp) protein (583aa)
Dihydroxyacetone kinase family protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V4I4_CLOPF
Dihydroxyacetone kinase family protein {ECO:0000313|EMBL:EDT71258.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
dihydroxyacetone kinase
L3_058_047G1_scaffold_61_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20687..21817)
DNA (1131bp) protein (377aa)
gldA; glycerol dehydrogenase (EC:1.1.1.6)
Glycerol dehydrogenase {ECO:0000313|EMBL:EDT13627.1}; EC=1.1.1.6 {ECO:0000313|EMBL:EDT13627.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Glycerol dehydrogenase n=9 Tax=Clostridium perfringens RepID=H7CRP6_CLOPF
L3_058_047G1_scaffold_61_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22437..22745
DNA (309bp) protein (103aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CRP5_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT13647.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_058_047G1_scaffold_61_23
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22991..24253)
DNA (1263bp) protein (421aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CWB1_CLOPF
PTS system sugar-specific permease component family protein
PTS system sugar-specific permease component family protein {ECO:0000313|EMBL:AIY82901.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_058_047G1_scaffold_61_24
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24385..24669)
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CWB2_CLOPF
PTS system, Lactose/Cellobiose specific IIB subunit
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:AIY83621.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_058_047G1_scaffold_61_25
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24708..25163)
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CWB3_CLOPF
phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein
PTS system mannitol-specific transporter subunit IIA {ECO:0000313|EMBL:KJU72085.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_058_047G1_scaffold_61_26
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25371..27506)
DNA (2136bp) protein (712aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CWB4_CLOPF
PRD domain protein {ECO:0000313|EMBL:AIY84143.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
PRD domain protein
L3_058_047G1_scaffold_61_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27977..29113)
DNA (1137bp) protein (379aa)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:EDT13634.1}; EC=1.3.8.1 {ECO:0000313|EMBL:EDT13634.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Acyl-CoA dehydrogenase n=7 Tax=Clostridium perfringens RepID=Q8XP68_CLOPE
acdS; acyl-CoA dehydrogenase
L3_058_047G1_scaffold_61_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29217..30767)
DNA (1551bp) protein (517aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
propionate CoA-transferase (EC:2.8.3.1)
Acetate CoA-transferase YdiF n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V4I0_CLOPF
L3_058_047G1_scaffold_61_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30870..31646)
DNA (777bp) protein (259aa)
Crotonase n=5 Tax=Clostridium perfringens RepID=Q8XP70_CLOPE
crotonase
Crotonase {ECO:0000313|EMBL:BAB79801.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_058_047G1_scaffold_61_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31877..32635)
DNA (759bp) protein (253aa)
Formate/nitrite transporter family protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BEP0_CLOPF
hypothetical protein
Formate/nitrite transporter family protein {ECO:0000313|EMBL:EDS81724.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Displaying items 1-30 of 42 in total

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