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L3_058_047G1_scaffold_63

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Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_047G1_scaffold_63_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(239..430)
DNA (192bp) protein (64aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CZX8_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82325.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_058_047G1_scaffold_63_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(540..1019)
DNA (480bp) protein (160aa)
MutT/nudix family protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V5U4_CLOPF
MutT/nudix family protein {ECO:0000313|EMBL:EDT70856.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
MutT/nudix family protein
L3_058_047G1_scaffold_63_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1147..2433)
DNA (1287bp) protein (429aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Adenylosuccinate synthetase n=8 Tax=Clostridium perfringens RepID=PURA_CLOPE
purA; adenylosuccinate synthetase
L3_058_047G1_scaffold_63_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2916..3596
DNA (681bp) protein (227aa)
sdhB; L-serine dehydratase, iron-sulfur-dependent subunit beta (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, beta subunit {ECO:0000313|EMBL:EDT13472.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EDT13472.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L-serine dehydratase, iron-sulfur-dependent, beta subunit n=9 Tax=Clostridium perfringens RepID=H7CZY1_CLOPF
L3_058_047G1_scaffold_63_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3597..4478
DNA (882bp) protein (294aa)
sdhA; L-serine dehydratase, iron-sulfur-dependent subunit alpha (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit {ECO:0000313|EMBL:EDS80517.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EDS80517.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L-serine dehydratase, iron-sulfur-dependent, alpha subunit n=7 Tax=Clostridium perfringens RepID=H7CZY2_CLOPF
L3_058_047G1_scaffold_63_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4705..5877
DNA (1173bp) protein (391aa)
Putative sugar isomerase, AgaS family n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TM25_CLOP1
sugar isomerase
Putative sugar isomerase {ECO:0000313|EMBL:EIA15758.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_058_047G1_scaffold_63_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5897..6754
DNA (858bp) protein (286aa)
gatY; tagatose-bisphosphate aldolase (EC:4.1.2.2)
Tagatose bisphosphate family class II aldolase n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CVV5_CLOPF
Putative tagatose-1,6-bisphosphate aldolase {ECO:0000313|EMBL:EDS80501.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_058_047G1_scaffold_63_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6810..7535)
DNA (726bp) protein (242aa)
Transcriptional regulator, GntR family n=3 Tax=Clostridium perfringens RepID=Q0TM23_CLOP1
GntR family transcriptional regulator
Probable transcriptional regulator {ECO:0000313|EMBL:BAB82333.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_058_047G1_scaffold_63_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7672..7935)
DNA (264bp) protein (88aa)
Putative preprotein translocase subunit n=2 Tax=Clostridium perfringens RepID=B1BI91_CLOPF
preprotein translocase subunit
Putative preprotein translocase subunit {ECO:0000313|EMBL:EDT13478.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_058_047G1_scaffold_63_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7952..8356)
DNA (405bp) protein (135aa)
PTS system, IIA component n=3 Tax=Clostridium perfringens RepID=H7CZY7_CLOPF
PTS system transporter subunit IIA
PTS system, IIA component {ECO:0000313|EMBL:EIA15762.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_058_047G1_scaffold_63_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8516..9322)
DNA (807bp) protein (269aa)
PTS system, IID component n=6 Tax=Clostridium perfringens RepID=H7CZY8_CLOPF
PTS system transporter subunit IID
PTS system, IID component {ECO:0000313|EMBL:EIA15763.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_058_047G1_scaffold_63_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9322..10113)
DNA (792bp) protein (264aa)
PTS system, IIC component n=10 Tax=Clostridium perfringens RepID=H7CZY9_CLOPF
PTS system transporter subunit IIC
PTS system, IIC component {ECO:0000313|EMBL:EDT13467.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_058_047G1_scaffold_63_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10160..10648)
DNA (489bp) protein (163aa)
PTS system, IIB component n=5 Tax=Clostridium perfringens RepID=H7CZZ0_CLOPF
PTS system transporter subunit IIB
PTS system, IIB component {ECO:0000313|EMBL:EIA15765.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_058_047G1_scaffold_63_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10926..11726)
DNA (801bp) protein (267aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BXV6_CLOPF
L3_058_047G1_scaffold_63_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11904..13238)
DNA (1335bp) protein (445aa)
dnaB; replicative DNA helicase (EC:3.6.1.-)
Replicative DNA helicase {ECO:0000313|EMBL:EDT13466.1}; EC=3.6.1.- {ECO:0000313|EMBL:EDT13466.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Replicative DNA helicase n=7 Tax=Clostridium perfringens RepID=Q0TM16_CLOP1
L3_058_047G1_scaffold_63_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13644..15542)
DNA (1899bp) protein (633aa)
ATP-dependent protease n=9 Tax=Clostridium perfringens RepID=H7CZZ3_CLOPF
ATP-dependent protease {ECO:0000313|EMBL:EIA15768.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
ATP-dependent protease
L3_058_047G1_scaffold_63_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15558..16004)
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=11 Tax=Clostridium perfringens RepID=RL9_CLOP1
rplI; 50S ribosomal protein L9
50S ribosomal protein L9 {ECO:0000255|HAMAP-Rule:MF_00503}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_058_047G1_scaffold_63_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16006..17964)
DNA (1959bp) protein (653aa)
DHH family protein n=2 Tax=Clostridium perfringens RepID=B1BI82_CLOPF
DHH family protein {ECO:0000313|EMBL:EDT13475.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
DHH family protein
L3_058_047G1_scaffold_63_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17997..18992)
DNA (996bp) protein (332aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XH47_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82344.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_058_047G1_scaffold_63_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19010..19327)
DNA (318bp) protein (106aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CZZ7_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT13480.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_058_047G1_scaffold_63_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19610..19852)
DNA (243bp) protein (81aa)
30S ribosomal protein S18 n=11 Tax=Clostridium perfringens RepID=RS18_CLOP1
rpsR; 30S ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_058_047G1_scaffold_63_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19883..20335)
DNA (453bp) protein (151aa)
Single-stranded DNA-binding protein n=10 Tax=Clostridium perfringens RepID=SSB_CLOPE
ssb; single-strand binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_058_047G1_scaffold_63_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(20349..20636)
DNA (288bp) protein (96aa)
30S ribosomal protein S6 n=11 Tax=Clostridium perfringens RepID=RS6_CLOP1
rpsF; 30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_058_047G1_scaffold_63_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20780..20992)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BI76_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT22620.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_058_047G1_scaffold_63_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21029..21889)
DNA (861bp) protein (287aa)
Mechanosensitive ion channel family protein n=7 Tax=Clostridium perfringens RepID=Q0TM06_CLOP1
mechanosensitive ion channel family protein
Mechanosensitive ion channel family protein {ECO:0000313|EMBL:EDT13617.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_058_047G1_scaffold_63_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21922..22155)
DNA (234bp) protein (78aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7D003_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA15778.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_058_047G1_scaffold_63_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22315..23031
DNA (717bp) protein (239aa)
LysE family translocator protein n=9 Tax=Clostridium perfringens RepID=H7D004_CLOPF
LysE family translocator protein
Translocator protein, LysE family {ECO:0000313|EMBL:EDT13599.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_058_047G1_scaffold_63_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22974..24134
DNA (1161bp) protein (387aa)
Cysteine desulfurase family protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SPR1_CLOPS
cysteine desulfurase family protein
Cysteine desulfurase family protein {ECO:0000313|EMBL:ABG87422.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_058_047G1_scaffold_63_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24146..25210
DNA (1065bp) protein (355aa)
Sporulation integral membrane protein YtvI n=4 Tax=Clostridium perfringens RepID=B1RAV4_CLOPF
Sporulation integral membrane protein YtvI {ECO:0000313|EMBL:EDT22635.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
sporulation integral membrane protein YtvI
L3_058_047G1_scaffold_63_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25260..25850
DNA (591bp) protein (197aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=Q8XH36_CLOPE
sporulation protein YyaC
Putative sporulation protein YyaC {ECO:0000313|EMBL:EIA15782.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Displaying items 1-30 of 48 in total

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