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L3_058_047G1_scaffold_104

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_047G1_scaffold_104_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..2309)
DNA (2307bp) protein (769aa)
Putative surface anchored protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R775_CLOPF
Putative surface anchored protein {ECO:0000313|EMBL:EDT23863.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
collagen-binding protein A
L3_058_047G1_scaffold_104_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3002..3718
DNA (717bp) protein (239aa)
Sortase n=2 Tax=Clostridium perfringens RepID=B1R776_CLOPF
Sortase {ECO:0000313|EMBL:EDT23900.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Sortase A, LPXTG specific
L3_058_047G1_scaffold_104_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3985..4311
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SWP1_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG86401.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_058_047G1_scaffold_104_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4546..5562
DNA (1017bp) protein (339aa)
C4-dicarboxylate transporter family protein n=2 Tax=Clostridium perfringens RepID=B1R779_CLOPF
C4-dicarboxylate transporter family protein {ECO:0000313|EMBL:EDT27284.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
C4-dicarboxylate transporter family protein
L3_058_047G1_scaffold_104_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6014..6166
DNA (153bp) protein (51aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q0SWN9_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDS81756.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_058_047G1_scaffold_104_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6385..7278)
DNA (894bp) protein (298aa)
Putative membrane protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BEK6_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDS81745.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L3_058_047G1_scaffold_104_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7608..8846
DNA (1239bp) protein (413aa)
Putative competence-damage inducible protein n=5 Tax=Clostridium perfringens RepID=CINA_CLOPE
cinA; competence damage-inducible protein A
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_058_047G1_scaffold_104_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9498..10424
DNA (927bp) protein (309aa)
CAAX amino terminal protease family protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BEK3_CLOPF
CAAX amino terminal protease
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EDS81757.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_058_047G1_scaffold_104_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10707..11300)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SWN3_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87242.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_058_047G1_scaffold_104_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11780..12049)
DNA (270bp) protein (90aa)
HesB-like domain protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SWN2_CLOPS
HesB family selenoprotein
HesB-like domain protein {ECO:0000313|EMBL:ABG85499.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_058_047G1_scaffold_104_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12421..13008
DNA (588bp) protein (196aa)
Rubrerythrin n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=RUBY_CLOPE
rubY; rubrerythrin
Rubrerythrin; Short=Rr;; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_058_047G1_scaffold_104_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13172..13717)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XP30_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79842.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_058_047G1_scaffold_104_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14147..14272
DNA (126bp) protein (42aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CRT3_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15451.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_058_047G1_scaffold_104_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14533..16089
DNA (1557bp) protein (519aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BS61_CLOPF
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT15486.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
ABC transporter
L3_058_047G1_scaffold_104_15
Lactobacillus iners, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16267..18528
DNA (2262bp) protein (754aa)
Uncharacterized protein n=2 Tax=Lactobacillus iners RepID=E3C417_9LACO
Uncharacterized protein {ECO:0000313|EMBL:EEW52166.1}; TaxID=525328 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus iners DSM 13335.;"
hypothetical protein
L3_058_047G1_scaffold_104_16
unknown

Not on your lists

19194..19949
DNA (756bp) protein (252aa)

This feature has no annotations

L3_058_047G1_scaffold_104_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19983..20144)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQV5_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS79685.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L3_058_047G1_scaffold_104_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20255..20830
DNA (576bp) protein (192aa)
BRO domain protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BKI4_CLOPF
BRO domain protein {ECO:0000313|EMBL:EDS79664.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
BRO domain-containing protein
L3_058_047G1_scaffold_104_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21358..21891
DNA (534bp) protein (178aa)
Probable RNA 2'-phosphotransferase {ECO:0000255|HAMAP-Rule:MF_00299}; EC=2.7.1.- {ECO:0000255|HAMAP-Rule:MF_00299};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Probable RNA 2'-phosphotransferase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=KPTA_CLOPS
RNA 2'-phosphotransferase-like protein
L3_058_047G1_scaffold_104_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22339..24516
DNA (2178bp) protein (726aa)
Cell wall surface anchor family protein n=2 Tax=Clostridium perfringens RepID=H7CRV3_CLOPF
Cell wall surface anchor family protein {ECO:0000313|EMBL:EIA18593.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
cell wall surface anchor family protein
L3_058_047G1_scaffold_104_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24520..26088
DNA (1569bp) protein (523aa)
Putative surface protein n=2 Tax=Clostridium perfringens RepID=B1RFD5_CLOPF
Putative surface protein {ECO:0000313|EMBL:EDT27360.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
surface protein
Displaying 21 items

View Taxonomy