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L3_058_052G1_scaffold_26

Search features with annotation key words

Displaying items 1-30 of 98 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_052G1_scaffold_26_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(453..1175)
DNA (723bp) protein (241aa)
MgtC family protein n=4 Tax=Clostridium perfringens RepID=B1BWJ9_CLOPF
MgtC family protein {ECO:0000313|EMBL:EDT13910.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
MgtC family protein
L3_058_052G1_scaffold_26_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1476..2399)
DNA (924bp) protein (308aa)
Glutaminase {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Glutaminase n=4 Tax=Clostridium perfringens RepID=H7CT30_CLOPF
glutaminase
L3_058_052G1_scaffold_26_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2703..4016)
DNA (1314bp) protein (438aa)
Voltage-gated chloride channel family protein n=2 Tax=Clostridium perfringens RepID=H7CT29_CLOPF
voltage-gated chloride channel family protein
Voltage-gated chloride channel family protein {ECO:0000313|EMBL:EIA18323.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_058_052G1_scaffold_26_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4389..5048)
DNA (660bp) protein (220aa)
Isochorismatase family protein n=3 Tax=Clostridium perfringens RepID=H7CT27_CLOPF
isochorismatase
Isochorismatase family protein {ECO:0000313|EMBL:EDT13904.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_058_052G1_scaffold_26_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5304..6404
DNA (1101bp) protein (367aa)
Probable permease n=2 Tax=Clostridium perfringens RepID=Q8XMV0_CLOPE
permease
Probable permease {ECO:0000313|EMBL:BAB80294.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_058_052G1_scaffold_26_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6455..6907)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RIL5_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT26180.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L3_058_052G1_scaffold_26_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7184..7930
DNA (747bp) protein (249aa)
DeoR family transcriptional regulator n=8 Tax=Clostridium perfringens RepID=H7CT24_CLOPF
DeoR family transcriptional regulator
Probable transcriptional regulator {ECO:0000313|EMBL:BAB80292.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_058_052G1_scaffold_26_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7930..8850
DNA (921bp) protein (307aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Tagatose-6-phosphate kinase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V655_CLOPF
fruB; 1-phosphofructokinase
L3_058_052G1_scaffold_26_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8854..10746
DNA (1893bp) protein (631aa)
PTS system, fructose-specific, IIABC component {ECO:0000313|EMBL:EDT70701.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EDT70701.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
PTS system, fructose-specific, IIABC component n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V656_CLOPF
PTS system transporter
L3_058_052G1_scaffold_26_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11161..12159)
DNA (999bp) protein (333aa)
Phosphate transporter family protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V657_CLOPF
Phosphate transporter family protein {ECO:0000313|EMBL:EDT70702.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
phosphate transporter family protein
L3_058_052G1_scaffold_26_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12152..12784)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SVH4_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87116.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_058_052G1_scaffold_26_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13069..13656)
DNA (588bp) protein (196aa)
CDP-alcohol phosphatidyltransferase family protein n=8 Tax=Clostridium perfringens RepID=H7CT19_CLOPF
CDP-alcohol phosphatidyltransferase
CDP-alcohol phosphatidyltransferase family protein {ECO:0000313|EMBL:EIA18313.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_058_052G1_scaffold_26_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13818..14930)
DNA (1113bp) protein (371aa)
Iron-sulfur cluster-binding protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BH33_CLOPF
Iron-sulfur cluster-binding protein {ECO:0000313|EMBL:EDS81064.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
iron-sulfur binding reductase
L3_058_052G1_scaffold_26_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14920..15615)
DNA (696bp) protein (232aa)
DedA family protein n=9 Tax=Clostridium perfringens RepID=H7CT17_CLOPF
DedA family protein
DedA family protein {ECO:0000313|EMBL:EDT13903.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_058_052G1_scaffold_26_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15965..16846)
DNA (882bp) protein (294aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CTN9_CLOPF
ABC transporter permease
ABC transporter, permease protein {ECO:0000313|EMBL:EIA18310.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_058_052G1_scaffold_26_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16848..17774)
DNA (927bp) protein (309aa)
ABC transporter permease n=6 Tax=Clostridium perfringens RepID=H7CT15_CLOPF
ABC transporter, permease protein {ECO:0000313|EMBL:EDT13923.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
ABC transporter permease
L3_058_052G1_scaffold_26_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17853..19238)
DNA (1386bp) protein (462aa)
ABC transporter n=4 Tax=Clostridium perfringens RepID=H7CT14_CLOPF
ABC transporter
ABC transporter {ECO:0000313|EMBL:EIA18308.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_058_052G1_scaffold_26_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19391..20980)
DNA (1590bp) protein (530aa)
DNA-binding response regulator, AraC family n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V665_CLOPF
DNA-binding response regulator, AraC family {ECO:0000313|EMBL:EDT70697.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
AraC family transcriptional regulator
L3_058_052G1_scaffold_26_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20993..22744)
DNA (1752bp) protein (584aa)
Sensor histidine kinase n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RIM8_CLOPF
Sensor histidine kinase {ECO:0000313|EMBL:EDT26185.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
sensor histidine kinase
L3_058_052G1_scaffold_26_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22928..25216)
DNA (2289bp) protein (763aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XMW5_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80279.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_058_052G1_scaffold_26_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25421..25669)
DNA (249bp) protein (83aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CT10_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT13925.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_058_052G1_scaffold_26_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26069..26476
DNA (408bp) protein (136aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CT08_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80277.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_058_052G1_scaffold_26_23
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26623..27462)
DNA (840bp) protein (280aa)
SIS domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QM25_9CLOT
SIS domain protein {ECO:0000313|EMBL:EKY28622.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
RpiR family phosphosugar-binding transcriptional regulator
L3_058_052G1_scaffold_26_24
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27621..28784)
DNA (1164bp) protein (388aa)
Outer surface protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CFU9_9CLOT
Cell surface protein {ECO:0000313|EMBL:KJU72204.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
L3_058_052G1_scaffold_26_25
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28868..30220)
DNA (1353bp) protein (451aa)
PTS system transporter subunit IIBC (EC:2.7.1.69)
Phosphotransferase system domain protein n=2 Tax=Clostridium botulinum RepID=B1IK80_CLOBK
Clostridium botulinum B2 450 B2_450_contig007, whole genome shotgun sequence {ECO:0000313|EMBL:KIS23354.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum B2 450.;"
L3_058_052G1_scaffold_26_26
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30403..31308)
DNA (906bp) protein (302aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
murQ; N-acetylmuramic acid 6-phosphate etherase (EC:4.2.1.126)
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VXU1_CLOBI
L3_058_052G1_scaffold_26_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31799..32467)
DNA (669bp) protein (223aa)
Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R7G2_CLOPF
Putative N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EDT23829.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
N-acetylmuramoyl-L-alanine amidase
L3_058_052G1_scaffold_26_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32836..35001
DNA (2166bp) protein (722aa)
Stage V sporulation protein D n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CTQ5_CLOPF
Stage V sporulation protein D {ECO:0000313|EMBL:EDT23827.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
spoVD; stage V sporulation protein D
L3_058_052G1_scaffold_26_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35459..36166)
DNA (708bp) protein (236aa)
Trehalose operon repressor n=2 Tax=Clostridium perfringens RepID=B1BWM3_CLOPF
treR; transcriptional regulator
Trehalose operon repressor {ECO:0000313|EMBL:EDT13916.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_058_052G1_scaffold_26_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36415..38082)
DNA (1668bp) protein (556aa)
Alpha,alpha-phosphotrehalase {ECO:0000313|EMBL:EDT26177.1}; EC=3.2.1.93 {ECO:0000313|EMBL:EDT26177.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
treC; alpha,alpha-phosphotrehalase (EC:3.2.1.93)
Alpha,alpha-phosphotrehalase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RNK0_CLOPF
Displaying items 1-30 of 98 in total

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