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L3_058_052G1_scaffold_27

Search features with annotation key words

Displaying items 1-30 of 117 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_052G1_scaffold_27_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..147)
DNA (147bp) protein (49aa)
Sodium:dicarboxylate symporter family protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TRC4_CLOP1
sodium:dicarboxylate symporter family protein
Sodium:dicarboxylate symporter family protein {ECO:0000313|EMBL:ABG85524.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_058_052G1_scaffold_27_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

640..2109
DNA (1470bp) protein (490aa)
Putative lysine-specific permease n=4 Tax=Clostridium perfringens RepID=Q0TRC5_CLOP1
lysine-specific permease
Putative lysine-specific permease {ECO:0000313|EMBL:EDT25422.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_058_052G1_scaffold_27_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2249..4288
DNA (2040bp) protein (680aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CVJ3_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA17311.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L3_058_052G1_scaffold_27_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4281..5177
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BKI1_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS79696.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L3_058_052G1_scaffold_27_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5170..6993
DNA (1824bp) protein (608aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CVJ1_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA17309.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L3_058_052G1_scaffold_27_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6998..8407
DNA (1410bp) protein (470aa)
Glycosyltransferase I n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BYC1_CLOPF
Glycosyltransferase I {ECO:0000313|EMBL:EDT13301.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_058_052G1_scaffold_27_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8411..9871
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BYC2_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT13305.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_058_052G1_scaffold_27_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9898..11277)
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V7R3_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT70150.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
L3_058_052G1_scaffold_27_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11455..12654)
DNA (1200bp) protein (400aa)
Threonine dehydratase, catabolic {ECO:0000313|EMBL:EDT13304.1}; EC=4.3.1.19 {ECO:0000313|EMBL:EDT13304.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
tdcB; threonine dehydratase (EC:4.3.1.19)
Threonine dehydratase, catabolic n=2 Tax=Clostridium perfringens RepID=B1BKH6_CLOPF
L3_058_052G1_scaffold_27_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12782..13000
DNA (219bp) protein (73aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CVI6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17304.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_058_052G1_scaffold_27_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13520..14872
DNA (1353bp) protein (451aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TRC8_CLOP1
xerC; site-specific tyrosine recombinase XerC
Site-specific tyrosine recombinase XerC {ECO:0000313|EMBL:EIA17303.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_058_052G1_scaffold_27_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14963..15355)
DNA (393bp) protein (131aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=H7CVI4_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17302.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_058_052G1_scaffold_27_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15564..16175
DNA (612bp) protein (204aa)
lexA; LexA repressor (EC:3.4.21.88)
LexA repressor {ECO:0000255|HAMAP-Rule:MF_00015}; EC=3.4.21.88 {ECO:0000255|HAMAP-Rule:MF_00015};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
LexA repressor n=2 Tax=Clostridium perfringens RepID=LEXA_CLOPE
L3_058_052G1_scaffold_27_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16350..17255)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XL82_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80866.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_058_052G1_scaffold_27_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17515..18795)
DNA (1281bp) protein (427aa)
Aluminum resistance protein n=3 Tax=Clostridium perfringens RepID=B1RBK2_CLOPF
Aluminum resistance protein {ECO:0000313|EMBL:EDT22395.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
aluminum resistance protein
L3_058_052G1_scaffold_27_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18900..19142)
DNA (243bp) protein (81aa)
RNA-binding protein Hfq n=9 Tax=Clostridium perfringens RepID=HFQ_CLOP1
RNA chaperone Hfq
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_058_052G1_scaffold_27_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19186..20118)
DNA (933bp) protein (311aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
tRNA dimethylallyltransferase n=3 Tax=Clostridium perfringens RepID=MIAA_CLOP1
L3_058_052G1_scaffold_27_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20136..22154)
DNA (2019bp) protein (673aa)
DNA mismatch repair protein MutL n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=MUTL_CLOPE
mutL; DNA mismatch repair protein
DNA mismatch repair protein MutL {ECO:0000255|HAMAP-Rule:MF_00149}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_058_052G1_scaffold_27_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22181..24910)
DNA (2730bp) protein (910aa)
DNA mismatch repair protein MutS n=1 Tax=Clostridium perfringens F262 RepID=H7CVH7_CLOPF
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
mutS; DNA mismatch repair protein MutS
L3_058_052G1_scaffold_27_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25175..25882)
DNA (708bp) protein (236aa)
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Pyruvate formate-lyase activating enzyme n=2 Tax=Clostridium perfringens RepID=Q0TRD7_CLOP1
L3_058_052G1_scaffold_27_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26236..28470)
DNA (2235bp) protein (745aa)
Formate acetyltransferase {ECO:0000313|EMBL:EDT13849.1}; EC=2.3.1.54 {ECO:0000313|EMBL:EDT13849.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
pfl; formate acetyltransferase (EC:2.3.1.54)
Formate acetyltransferase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BWR2_CLOPF
L3_058_052G1_scaffold_27_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28839..30179)
DNA (1341bp) protein (447aa)
Citrate/sodium symporter n=2 Tax=Clostridium perfringens RepID=B1V5J6_CLOPF
citN; citrate/sodium symporter
Probable citrate/sodium symporter {ECO:0000313|EMBL:BAB80858.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_058_052G1_scaffold_27_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30200..31345)
DNA (1146bp) protein (382aa)
NAD-dependent malic enzyme (NAD-ME) {ECO:0000313|EMBL:EDS81333.1}; EC=1.1.1.38 {ECO:0000313|EMBL:EDS81333.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
NAD-dependent malic enzyme (NAD-ME) n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BFS5_CLOPF
malate oxidoreductase
L3_058_052G1_scaffold_27_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31386..31898)
DNA (513bp) protein (171aa)
Probable CitG protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XL92_CLOPE
triphosphoribosyl-dephospho-CoA synthase
Probable CitG protein {ECO:0000313|EMBL:BAB80856.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_058_052G1_scaffold_27_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31918..33477)
DNA (1560bp) protein (520aa)
Citrate lyase alpha subunit n=2 Tax=Clostridium perfringens RepID=Q8XL93_CLOPE
cilA; citrate lyase subunit alpha
Citrate lyase alpha subunit {ECO:0000313|EMBL:BAB80855.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_058_052G1_scaffold_27_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33481..34371)
DNA (891bp) protein (297aa)
Citrate (Pro-3S)-lyase, beta subunit {ECO:0000313|EMBL:EDT13832.1}; EC=4.1.3.6 {ECO:0000313|EMBL:EDT13832.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
citE; citrate lyase, beta subunit (EC:4.1.3.6)
Citrate (Pro-3S)-lyase, beta subunit n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BWR7_CLOPF
L3_058_052G1_scaffold_27_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34359..34664)
DNA (306bp) protein (102aa)
Citrate lyase acyl carrier protein n=2 Tax=Clostridium perfringens RepID=H7CVG9_CLOPF
Citrate lyase acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_00805}; Citrate lyase gamma chain {ECO:0000256|HAMAP-Rule:MF_00805}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
citD; citrate lyase subunit gamma
L3_058_052G1_scaffold_27_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34688..35725)
DNA (1038bp) protein (346aa)
Citrate (Pro-3S)-lyase ligase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XL96_CLOPE
citC; citrate (pro-3S)-lyase ligase
Citrate (Pro-3S)-lyase ligase {ECO:0000313|EMBL:BAB80852.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_058_052G1_scaffold_27_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36002..36862
DNA (861bp) protein (287aa)
citG; triphosphoribosyl-dephospho-CoA synthase (EC:2.7.8.25)
Probable 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase {ECO:0000256|HAMAP-Rule:MF_00397}; Short=2-(5''-triphosphoribosyl)-3'-dephospho-CoA synthase {ECO:0000256|HAMAP-Rule:MF_00397};; EC=2.4.2.52 {ECO:0000256|HAMAP-Rule:MF_00397};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Probable 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BWR9_CLOPF
L3_058_052G1_scaffold_27_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36911..37876
DNA (966bp) protein (322aa)
Probable transcriptional regulator n=2 Tax=Clostridium perfringens RepID=B1BFT1_CLOPF
Probable transcriptional regulator {ECO:0000313|EMBL:EDS81327.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
transcriptional regulator
Displaying items 1-30 of 117 in total

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