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L3_058_052G1_scaffold_68

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_052G1_scaffold_68_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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455..1303
DNA (849bp) protein (283aa)
Sortase family protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQW9_CLOPF
Sortase family protein {ECO:0000313|EMBL:EDT72412.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
sortase
L3_058_052G1_scaffold_68_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1372..2283
DNA (912bp) protein (304aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CRV6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18596.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_058_052G1_scaffold_68_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2845..3438
DNA (594bp) protein (198aa)
Putative membrane protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V1A2_CLOPF
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT15446.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_058_052G1_scaffold_68_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3720..4376
DNA (657bp) protein (219aa)
Conserved domain protein n=2 Tax=Clostridium perfringens RepID=B1RFD1_CLOPF
Conserved domain protein {ECO:0000313|EMBL:EDT27363.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L3_058_052G1_scaffold_68_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4453..5004
DNA (552bp) protein (184aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1RFD0_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT27351.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_058_052G1_scaffold_68_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5210..6676)
DNA (1467bp) protein (489aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1BKK3_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT15460.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_058_052G1_scaffold_68_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7337..8368
DNA (1032bp) protein (344aa)
Putative membrane protein n=6 Tax=Clostridium perfringens RepID=Q0SWL1_CLOPS
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:ABG86349.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_058_052G1_scaffold_68_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8957..10459
DNA (1503bp) protein (501aa)
Perfringolysin O n=2 Tax=Clostridium perfringens RepID=TACY_CLOP1
perfringolysin O
Perfringolysin O {ECO:0000313|EMBL:EDT15531.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_058_052G1_scaffold_68_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10655..11113
DNA (459bp) protein (153aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=H7CRW3_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18603.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_058_052G1_scaffold_68_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12035..13513
DNA (1479bp) protein (493aa)
Amino acid permease family protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SWK8_CLOPS
amino acid permease
Amino acid permease family protein {ECO:0000313|EMBL:ABG86110.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_058_052G1_scaffold_68_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13669..15738
DNA (2070bp) protein (690aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase n=1 Tax=Clostridium perfringens F262 RepID=H7CRW5_CLOPF
L3_058_052G1_scaffold_68_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16291..17532
DNA (1242bp) protein (414aa)
arcA; arginine deiminase (EC:3.5.3.6)
Arginine deiminase {ECO:0000255|HAMAP-Rule:MF_00242}; Short=ADI {ECO:0000255|HAMAP-Rule:MF_00242};; EC=3.5.3.6 {ECO:0000255|HAMAP-Rule:MF_00242};; Arginine dihydrolase {ECO:0000255|HAMAP-Rule:MF_00242}; Short=AD {ECO:0000255|HAMAP-Rule:MF_00242};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Arginine deiminase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=ARCA_CLOPS
L3_058_052G1_scaffold_68_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17633..18628
DNA (996bp) protein (332aa)
argF; ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Ornithine carbamoyltransferase, catabolic n=8 Tax=Clostridium perfringens RepID=OTCC_CLOP1
L3_058_052G1_scaffold_68_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18773..20209
DNA (1437bp) protein (479aa)
Arginine/ornithine antiporter n=2 Tax=Clostridium perfringens RepID=ARCD_CLOPE
arcD; arginine/ornithine antiporter
Arginine/ornithine antiporter; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_058_052G1_scaffold_68_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20270..21214
DNA (945bp) protein (315aa)
arcC; carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=5 Tax=Clostridium perfringens RepID=H7CRW9_CLOPF
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_058_052G1_scaffold_68_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21288..21743
DNA (456bp) protein (152aa)
Arginine regulator n=6 Tax=Clostridium perfringens RepID=ARGR1_CLOPE
argR; arginine repressor ArgR
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_058_052G1_scaffold_68_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22285..25599
DNA (3315bp) protein (1105aa)
Collagenase n=1 Tax=Clostridium perfringens F262 RepID=H7CRX1_CLOPF
Collagenase {ECO:0000313|EMBL:EIA18611.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
colA; collagenase
L3_058_052G1_scaffold_68_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25745..26203)
DNA (459bp) protein (153aa)
Large-conductance mechanosensitive channel n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CW27_CLOPF
mscL; large-conductance mechanosensitive channel
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_058_052G1_scaffold_68_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26666..27640
DNA (975bp) protein (325aa)
Putative esterase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BS18_CLOPF
Putative esterase {ECO:0000313|EMBL:EDT15509.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
lipA; lipase
L3_058_052G1_scaffold_68_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27787..28578)
DNA (792bp) protein (264aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1R7B6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT23867.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_058_052G1_scaffold_68_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28583..29401)
DNA (819bp) protein (273aa)
Putative ABC transporter, permease protein n=2 Tax=Clostridium perfringens RepID=B1RFB0_CLOPF
Putative ABC transporter, permease protein {ECO:0000313|EMBL:EDT27281.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
ABC transporter permease
L3_058_052G1_scaffold_68_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29404..30429)
DNA (1026bp) protein (342aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RFA9_CLOPF
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT27277.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
ABC transporter ATP-binding protein
L3_058_052G1_scaffold_68_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30813..31478
DNA (666bp) protein (222aa)
N-acetylmannosamine-6-phosphate 2-epimerase (EC:5.1.3.9)
Putative N-acetylmannosamine-6-phosphate 2-epimerase {ECO:0000255|HAMAP-Rule:MF_01235}; EC=5.1.3.9 {ECO:0000255|HAMAP-Rule:MF_01235};; ManNAc-6-P epimerase {ECO:0000255|HAMAP-Rule:MF_01235}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Putative N-acetylmannosamine-6-phosphate 2-epimerase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQZ7_CLOPF
L3_058_052G1_scaffold_68_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31515..32381
DNA (867bp) protein (289aa)
nanA; N-acetylneuraminate lyase (EC:4.1.3.3)
N-acetylneuraminate lyase; Short=NAL;; Short=Neu5Ac lyase;; EC=4.1.3.3;; N-acetylneuraminate pyruvate-lyase; N-acetylneuraminic acid aldolase; Sialate lyase; Sialic acid aldolase; Sialic acid lyase; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
N-acetylneuraminate lyase n=7 Tax=Clostridium perfringens RepID=NANA_CLOP1
L3_058_052G1_scaffold_68_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32485..34002
DNA (1518bp) protein (506aa)
Sodium/solute symporter family protein n=4 Tax=Clostridium perfringens RepID=H7CRY4_CLOPF
sodium/solute symporter family protein
Sodium/solute symporter family protein {ECO:0000313|EMBL:EIA18624.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_058_052G1_scaffold_68_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34113..34565
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XNZ1_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79893.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_058_052G1_scaffold_68_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34721..35608
DNA (888bp) protein (296aa)
ROK family protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RFA3_CLOPF
ROK family protein {ECO:0000313|EMBL:EDT27358.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
ROK family protein
L3_058_052G1_scaffold_68_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35789..36628
DNA (840bp) protein (280aa)
Uncharacterized HTH-type transcriptional regulator CPE0189 n=9 Tax=Clostridium perfringens RepID=Y189_CLOPE
RpiR family transcriptional regulator
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EDT15444.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_058_052G1_scaffold_68_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36836..37225)
DNA (390bp) protein (130aa)
Putative membrane protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SWI3_CLOPS
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:ABG87001.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_058_052G1_scaffold_68_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37899..38642
DNA (744bp) protein (248aa)
Cobalt transport protein CbiM n=8 Tax=Clostridium perfringens RepID=H7CRZ0_CLOPF
cbiM; cobalt transport protein CbiM
Cobalt transport protein CbiM {ECO:0000256|HAMAP-Rule:MF_01462}; Energy-coupling factor transporter probable substrate-capture protein CbiM {ECO:0000256|HAMAP-Rule:MF_01462}; Flags: Precursor;; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Displaying items 1-30 of 37 in total

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