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L3_058_063G1_scaffold_141

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Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_063G1_scaffold_141_1
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(569..1339)
DNA (771bp) protein (257aa)
RNA polymerase sigma-70 factor, sigma-B/F/G subfamily n=3 Tax=Clostridiales RepID=B0A618_9FIRM
RNA polymerase sigma-70 factor, sigma-B/F/G subfamily {ECO:0000313|EMBL:EDQ97912.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
sigB; RNA polymerase sigma-B factor
L3_058_063G1_scaffold_141_2
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1339..1746)
DNA (408bp) protein (136aa)
Putative anti-sigma B factor n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XGP9_9CLOT
Putative anti-sigma B factor {ECO:0000313|EMBL:CDA11554.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
anti-sigma-B factor (serine-protein kinase)
L3_058_063G1_scaffold_141_3

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comp(1749..2066)
DNA (318bp) protein (106aa)
Anti-sigma factor antagonist n=2 Tax=Clostridiales RepID=B0A620_9FIRM
Stage II sporulation protein {ECO:0000313|EMBL:ETJ17106.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
anti-sigma-B factor antagonist
L3_058_063G1_scaffold_141_4
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2092..2349)
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0A621_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ97915.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L3_058_063G1_scaffold_141_5
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2349..2633)
DNA (285bp) protein (95aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0A622_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ97916.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L3_058_063G1_scaffold_141_6
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2852..5281)
DNA (2430bp) protein (810aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=2 Tax=Clostridiales RepID=B0A623_9FIRM
L3_058_063G1_scaffold_141_7
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5300..7201)
DNA (1902bp) protein (634aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
DNA gyrase subunit B n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XGP5_9CLOT
gyrB; DNA gyrase subunit B
L3_058_063G1_scaffold_141_8

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comp(7202..8317)
DNA (1116bp) protein (372aa)
DNA replication and repair protein RecF n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X7D8_9CLOT
DNA replication and repair protein RecF {ECO:0000313|EMBL:ETJ17111.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
DNA replication and repair protein
L3_058_063G1_scaffold_141_9
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8338..8544)
DNA (207bp) protein (69aa)
S4 domain protein YaaA n=2 Tax=Clostridiales RepID=B0A626_9FIRM
S4 domain protein YaaA {ECO:0000313|EMBL:CDA11547.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
RNA-binding mediating protein
L3_058_063G1_scaffold_141_10
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8693..9808)
DNA (1116bp) protein (372aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
dnaN; DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XS06_9CLOT
L3_058_063G1_scaffold_141_11
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10073..11428)
DNA (1356bp) protein (452aa)
Chromosomal replication initiator protein DnaA n=2 Tax=Clostridiales RepID=B0A628_9FIRM
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
dnaA; chromosomal replication initiator protein
L3_058_063G1_scaffold_141_12
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12417..12551
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=2 Tax=Clostridiales RepID=B0A629_9FIRM
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
rpmH; 50S ribosomal protein L34
L3_058_063G1_scaffold_141_13
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12651..12995
DNA (345bp) protein (115aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
rnpA; ribonuclease P (EC:3.1.26.5)
Ribonuclease P protein component n=2 Tax=Clostridiales RepID=B0A630_9FIRM
L3_058_063G1_scaffold_141_14
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13029..13280
DNA (252bp) protein (84aa)
Putative membrane protein insertion efficiency factor n=2 Tax=Clostridiales RepID=B0A631_9FIRM
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L3_058_063G1_scaffold_141_15
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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13303..14067
DNA (765bp) protein (255aa)
Membrane protein insertase, YidC/Oxa1 family n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A632_9FIRM
Membrane protein insertase, YidC/Oxa1 family {ECO:0000313|EMBL:EDQ97926.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
sporulation membrane protein
L3_058_063G1_scaffold_141_16

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14051..14707
DNA (657bp) protein (219aa)
R3H domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X9R1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETJ17119.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
SpoIIIJ-associated protein
L3_058_063G1_scaffold_141_17

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14876..16255
DNA (1380bp) protein (460aa)
tRNA modification GTPase MnmE n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XGN9_9CLOT
tRNA modification GTPase MnmE {ECO:0000313|EMBL:ETJ17120.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
trmE; tRNA modification GTPase TrmE
L3_058_063G1_scaffold_141_18
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16424..18319
DNA (1896bp) protein (632aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=2 Tax=Clostridiales RepID=B0A635_9FIRM
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
L3_058_063G1_scaffold_141_19
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18312..19031
DNA (720bp) protein (240aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A636_9FIRM
gidB; 16S rRNA methyltransferase GidB
L3_058_063G1_scaffold_141_20
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19191..19976
DNA (786bp) protein (262aa)
ParB-like protein n=2 Tax=Clostridiales RepID=B0A637_9FIRM
ParB-like protein {ECO:0000313|EMBL:CDA11536.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
stage 0 sporulation protein
L3_058_063G1_scaffold_141_21
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20059..20880
DNA (822bp) protein (274aa)
ParB-like protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A638_9FIRM
ParB-like protein {ECO:0000313|EMBL:EDQ97932.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
spo0J; stage 0 sporulation protein J
L3_058_063G1_scaffold_141_22
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21196..22488
DNA (1293bp) protein (431aa)
Tetratricopeptide repeat protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A639_9FIRM
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDQ97933.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
transcriptional regulator
L3_058_063G1_scaffold_141_23

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22650..22910
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0A640_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ17126.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_058_063G1_scaffold_141_24
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22927..23118
DNA (192bp) protein (64aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0A641_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ97935.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L3_058_063G1_scaffold_141_25
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


23297..23575
DNA (279bp) protein (93aa)
30S ribosomal protein S6 n=2 Tax=Clostridiales RepID=B0A642_9FIRM
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
30S ribosomal protein S6
L3_058_063G1_scaffold_141_26

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23615..24055
DNA (441bp) protein (147aa)
Single-stranded DNA-binding protein n=2 Tax=Clostridiales RepID=B0A643_9FIRM
Single-stranded DNA-binding protein {ECO:0000313|EMBL:ETJ17129.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
ssb; single-strand binding protein
L3_058_063G1_scaffold_141_27

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24077..24304
DNA (228bp) protein (76aa)
30S ribosomal protein S18 n=2 Tax=Clostridiales RepID=B0A644_9FIRM
30S ribosomal protein S18 {ECO:0000313|EMBL:ETJ17130.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
rpsR; 30S ribosomal protein S18
L3_058_063G1_scaffold_141_28

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24640..25020
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A645_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ17131.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_058_063G1_scaffold_141_29

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25013..25987
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5Y4H0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETJ17132.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_058_063G1_scaffold_141_30

Not on your lists

25998..28004
DNA (2007bp) protein (669aa)
DHHA1 domain protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A647_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ17133.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
RNA/single-stranded DNA exonuclease
Displaying items 1-30 of 73 in total

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