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L3_058_063G1_scaffold_220

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_063G1_scaffold_220_1
unknown

Not on your lists

2..247
DNA (246bp) protein (82aa)

This feature has no annotations

L3_058_063G1_scaffold_220_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(293..868)
DNA (576bp) protein (192aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=R0ABZ7_CLOBU
Putative sporulation protein YyaC {ECO:0000313|EMBL:EEP52445.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
yyaC3; putative sporulation protein YyaC
L3_058_063G1_scaffold_220_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(925..2076)
DNA (1152bp) protein (384aa)
Cysteine desulfurase {ECO:0000313|EMBL:KJZ87028.1}; EC=2.8.1.7 {ECO:0000313|EMBL:KJZ87028.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
csd3; cysteine desulfurase Csd (EC:2.8.1.7)
Cysteine desulfurase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YSA1_CLOBU
L3_058_063G1_scaffold_220_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2130..2777)
DNA (648bp) protein (216aa)
LysE type translocator n=4 Tax=Clostridium butyricum RepID=B1QSP3_CLOBU
Translocator protein, LysE family {ECO:0000313|EMBL:KJZ87030.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative threonine efflux protein
L3_058_063G1_scaffold_220_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2930..3169
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JFL3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30292.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein DUF3343
L3_058_063G1_scaffold_220_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3193..4086
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A1E5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30293.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
mechanosensitive ion channel family protein
L3_058_063G1_scaffold_220_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4086..4280
DNA (195bp) protein (65aa)
Conserved domain protein n=4 Tax=Clostridium butyricum RepID=B1QSP6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30294.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L3_058_063G1_scaffold_220_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4382..4669
DNA (288bp) protein (96aa)
30S ribosomal protein S6 n=4 Tax=Clostridium butyricum RepID=B1QSP7_CLOBU
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
rpsF; 30S ribosomal protein S6
L3_058_063G1_scaffold_220_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4683..5135
DNA (453bp) protein (151aa)
Single-stranded DNA-binding protein n=4 Tax=Clostridium butyricum RepID=B1QSP8_CLOBU
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
single-strand binding protein
L3_058_063G1_scaffold_220_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5164..5421
DNA (258bp) protein (86aa)
30S ribosomal protein S18 n=4 Tax=Clostridium butyricum RepID=B1QSP9_CLOBU
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
rpsR; 30S ribosomal protein S18
L3_058_063G1_scaffold_220_11
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5695..6024
DNA (330bp) protein (110aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QSQ0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ93292.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
MazG-like family
L3_058_063G1_scaffold_220_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6045..7982
DNA (1938bp) protein (646aa)
DHH family protein n=3 Tax=Clostridium butyricum RepID=B1QSQ1_CLOBU
Phosphoesterase, DHH family protein {ECO:0000313|EMBL:KJZ87009.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
phosphoesterase domain-containing protein
L3_058_063G1_scaffold_220_13
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7985..8431
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=4 Tax=Clostridium butyricum RepID=B1QSQ2_CLOBU
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
rplI; 50S ribosomal protein L9
L3_058_063G1_scaffold_220_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8444..10339
DNA (1896bp) protein (632aa)
lon3; Lon protease 2 (EC:3.4.21.53)
ATP-dependent protease, Lon family n=3 Tax=Clostridium butyricum RepID=B1QSQ3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87010.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L3_058_063G1_scaffold_220_15
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10455..11813
DNA (1359bp) protein (453aa)
dnaC; replicative DNA helicase DnaC (EC:3.6.4.12)
UPI0003D65A6F related cluster n=1 Tax=unknown RepID=UPI0003D65A6F
Sodium-dependent transporter {ECO:0000313|EMBL:KJZ85021.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
L3_058_063G1_scaffold_220_16
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11937..12290)
DNA (354bp) protein (118aa)
PTS system, cellobiose-specific IIB component {ECO:0000313|EMBL:KJZ85049.1}; EC=2.7.1.69 {ECO:0000313|EMBL:KJZ85049.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A1F2_CLOBU
hypothetical protein
L3_058_063G1_scaffold_220_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12436..13236
DNA (801bp) protein (267aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
proC2; pyrroline-5-carboxylate reductase ProC (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=4 Tax=Clostridium butyricum RepID=B1QSQ5_CLOBU
L3_058_063G1_scaffold_220_18
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13650..14825)
DNA (1176bp) protein (392aa)
NADP-dependent malic enzyme {ECO:0000313|EMBL:KJZ93279.1}; EC=1.1.1.40 {ECO:0000313|EMBL:KJZ93279.1};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
NAD-dependent malic enzyme (EC:1.1.1.38)
NAD-dependent malic enzyme n=2 Tax=Clostridium butyricum RepID=B1QSQ8_CLOBU
L3_058_063G1_scaffold_220_19
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15159..16445
DNA (1287bp) protein (429aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
purA; adenylosuccinate synthetase PurA (EC:6.3.4.4)
Adenylosuccinate synthetase n=2 Tax=Clostridium butyricum RepID=C4IMU0_CLOBU
L3_058_063G1_scaffold_220_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16544..16726
DNA (183bp) protein (61aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=M8JEB9_CLOBU
Disulfide oxidoreductase {ECO:0000313|EMBL:KHD13921.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hybrid cluster protein-associated redox disulfide domain protein
L3_058_063G1_scaffold_220_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17338..18324
DNA (987bp) protein (329aa)
UPI0003AAA144 related cluster n=1 Tax=unknown RepID=UPI0003AAA144
Sodium-dependent transporter {ECO:0000313|EMBL:ETI91971.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
Predicted Na+-dependent transporter
L3_058_063G1_scaffold_220_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18577..19335
DNA (759bp) protein (253aa)
Acyl-acyl carrier protein thioesterase n=3 Tax=Clostridium butyricum RepID=B1QU73_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30309.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
acyl-ACP thioesterase
L3_058_063G1_scaffold_220_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19403..20650)
DNA (1248bp) protein (416aa)
NAD n=4 Tax=Clostridium butyricum RepID=B1QU72_CLOBU
HI0933 family flavoprotein {ECO:0000313|EMBL:ENZ30310.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
HI0933 family protein
L3_058_063G1_scaffold_220_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20893..21459
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JEC4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ETI91968.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
L3_058_063G1_scaffold_220_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22339..23322)
DNA (984bp) protein (328aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=R0A1A2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30243.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
DNA replication protein
L3_058_063G1_scaffold_220_26
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23312..24304)
DNA (993bp) protein (331aa)
Primosome, DnaD subunit n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J5D9_CLOBU
DNA replication protein DnaD {ECO:0000313|EMBL:KJZ95311.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
DnaD-like protein
L3_058_063G1_scaffold_220_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24511..25716)
DNA (1206bp) protein (402aa)
Subtilase family protein n=3 Tax=Clostridium butyricum RepID=B1QTH3_CLOBU
Peptidase S8 and S53, subtilisin, kexin, sedolisin {ECO:0000313|EMBL:EEP52435.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
peptidase S8/S53 subtilisin kexin sedolisin
L3_058_063G1_scaffold_220_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25794..26609)
DNA (816bp) protein (272aa)
Beta-lactamase domain protein n=2 Tax=Clostridium butyricum RepID=M8K103_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30246.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
fold6; putative Zn-dependent hydrolase of the beta-lactamase Fold protein
L3_058_063G1_scaffold_220_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26626..27057)
DNA (432bp) protein (144aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QTH1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30247.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L3_058_063G1_scaffold_220_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27209..27682)
DNA (474bp) protein (158aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QTH0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30248.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
Displaying items 1-30 of 66 in total

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