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L3_058_063G1_scaffold_327

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_063G1_scaffold_327_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(132..1619)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YSL0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30425.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
peptide ABC transporter periplasmic protein
L3_058_063G1_scaffold_327_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1823..2125
DNA (303bp) protein (101aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R0A5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83350.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L3_058_063G1_scaffold_327_3
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2180..3610)
DNA (1431bp) protein (477aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=2 Tax=Clostridium butyricum RepID=M8K256_CLOBU
L3_058_063G1_scaffold_327_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3630..5087)
DNA (1458bp) protein (486aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
gatA; glutamyl-tRNA(Gln) amidotransferase subunit A (EC:6.3.5.-)
UPI00039D444D related cluster n=1 Tax=unknown RepID=UPI00039D444D
L3_058_063G1_scaffold_327_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5109..5399)
DNA (291bp) protein (97aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
gatC1; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=2 Tax=Clostridium butyricum RepID=B1R0A2_CLOBU
L3_058_063G1_scaffold_327_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5710..5982)
DNA (273bp) protein (91aa)
UPI0003D60D70 related cluster n=1 Tax=unknown RepID=UPI0003D60D70
Uncharacterized protein {ECO:0000313|EMBL:ETI91568.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
L3_058_063G1_scaffold_327_7
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5987..7978)
DNA (1992bp) protein (664aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
ligA; DNA ligase LigA (EC:6.5.1.2)
DNA ligase n=2 Tax=Clostridium butyricum RepID=M8KAD8_CLOBU
L3_058_063G1_scaffold_327_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8154..11507)
DNA (3354bp) protein (1118aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
pcrA; ATP-dependent DNA helicase PcrA (EC:3.6.4.12)
ATP-dependent DNA helicase PcrA n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K259_CLOBU
L3_058_063G1_scaffold_327_9
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12101..12817)
DNA (717bp) protein (239aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
ytzG1; RNA pseudouridine synthase YtzG (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JGR2_CLOBU
L3_058_063G1_scaffold_327_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13019..13852)
DNA (834bp) protein (278aa)
Lytic transglycosylase, catalytic n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JGQ6_CLOBU
Lytic murein transglycosylase {ECO:0000313|EMBL:ETI91572.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
lytic transglycosylase, catalytic
L3_058_063G1_scaffold_327_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13907..16324)
DNA (2418bp) protein (806aa)
Two component regulator three Y domain protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J6I5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83358.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Y_Y_Y domain containing protein
L3_058_063G1_scaffold_327_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16535..16981)
DNA (447bp) protein (149aa)
UPF0178 protein CBDKU1_27660 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KAB0_CLOBU
UPF0178 protein HMPREF1084_03799 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein DUF188
L3_058_063G1_scaffold_327_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16987..18336)
DNA (1350bp) protein (450aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
pgi; glucose-6-phosphate isomerase Pgi (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=5 Tax=Clostridium butyricum RepID=B1R095_CLOBU
Displaying 13 items

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