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L3_058_072G1_scaffold_1005

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_072G1_scaffold_1005_1
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3..158)
DNA (156bp) protein (52aa)
UPI0003D670B1 related cluster n=1 Tax=unknown RepID=UPI0003D670B1
Uncharacterized protein {ECO:0000313|EMBL:ETI89972.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L3_058_072G1_scaffold_1005_2
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(97..534)
DNA (438bp) protein (146aa)
UPI0003D61570 related cluster n=1 Tax=unknown RepID=UPI0003D61570
Uncharacterized protein {ECO:0000313|EMBL:ETI89971.1}; Flags: Fragment;; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L3_058_072G1_scaffold_1005_3

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comp(628..939)
DNA (312bp) protein (104aa)
Cell wall-associated protein n=1 Tax=Bacillus pumilus (strain SAFR-032) RepID=A8FFI8_BACP2
Wall-associated protein {ECO:0000313|EMBL:ETJ18460.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
wapA; cell wall-associated protein
L3_058_072G1_scaffold_1005_4
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1182..1811)
DNA (630bp) protein (210aa)
UPI0003D67189 related cluster n=1 Tax=unknown RepID=UPI0003D67189
Uncharacterized protein {ECO:0000313|EMBL:ETI96752.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
hypothetical protein
L3_058_072G1_scaffold_1005_5
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2472..3101
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5Y097_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA10102.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L3_058_072G1_scaffold_1005_6
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3252..4133)
DNA (882bp) protein (294aa)
Glycosyl hydrolase family 25 n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XN29_9CLOT
Glycosyl hydrolase family 25 {ECO:0000313|EMBL:CDA10101.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
glycoside hydrolase family 25
L3_058_072G1_scaffold_1005_7
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4355..4840
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X5Q3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA10100.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L3_058_072G1_scaffold_1005_8
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5110..5283)
DNA (174bp) protein (58aa)
HTH-type transcriptional activator HxlR n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XCK7_9CLOT
HTH-type transcriptional activator HxlR {ECO:0000313|EMBL:CDA10099.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
HxlR family transcriptional regulator
L3_058_072G1_scaffold_1005_9
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5551..5799
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X344_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA10098.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L3_058_072G1_scaffold_1005_10
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5935..6453)
DNA (519bp) protein (173aa)
UPI0003D641D2 related cluster n=1 Tax=unknown RepID=UPI0003D641D2
Uncharacterized protein {ECO:0000313|EMBL:ETI90912.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L3_058_072G1_scaffold_1005_11
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6399..6971)
DNA (573bp) protein (191aa)
UPI0003D63D7C related cluster n=1 Tax=unknown RepID=UPI0003D63D7C
PadR family transcriptional regulator {ECO:0000313|EMBL:ETI90911.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
PadR family transcriptional regulator
L3_058_072G1_scaffold_1005_12

Not on your lists

7334..7858
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ37317.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
phosphoesterase, HXTX
L3_058_072G1_scaffold_1005_13

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8039..8854
DNA (816bp) protein (272aa)
Uncharacterized protein {ECO:0000313|EMBL:ETJ44336.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_058_072G1_scaffold_1005_14
unknown

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9045..9284
DNA (240bp) protein (80aa)

This feature has no annotations

L3_058_072G1_scaffold_1005_15

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comp(9421..10554)
DNA (1134bp) protein (378aa)
Putative beta-lactams signal-transducer n=5 Tax=Clostridium difficile RepID=U3WM80_CLODI
Peptidase, M56 family {ECO:0000313|EMBL:ETJ44335.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
putative beta-lactams signal-transducer
L3_058_072G1_scaffold_1005_16

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comp(10558..10938)
DNA (381bp) protein (127aa)
Transcriptional repressor, CopY family n=1 Tax=Clostridium sp. DL-VIII RepID=G7M0U5_9CLOT
Transcriptional repressor, CopY family {ECO:0000313|EMBL:ETJ44334.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
regulatory protein
L3_058_072G1_scaffold_1005_17

Not on your lists

11470..12288
DNA (819bp) protein (273aa)
Uncharacterized protein {ECO:0000313|EMBL:ETJ44345.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_058_072G1_scaffold_1005_18

Not on your lists

12322..12729
DNA (408bp) protein (136aa)
Uncharacterized protein {ECO:0000313|EMBL:ETJ44344.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_058_072G1_scaffold_1005_19

Not on your lists

13296..13538
DNA (243bp) protein (81aa)
Uncharacterized protein {ECO:0000313|EMBL:ETJ37139.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_058_072G1_scaffold_1005_20
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13652..15502)
DNA (1851bp) protein (617aa)
UPI0003D65F56 related cluster n=1 Tax=unknown RepID=UPI0003D65F56
Uncharacterized protein {ECO:0000313|EMBL:ETI95554.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
hypothetical protein
L3_058_072G1_scaffold_1005_21
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15684..16316)
DNA (633bp) protein (211aa)
UPI0003D5E88F related cluster n=1 Tax=unknown RepID=UPI0003D5E88F
Uncharacterized protein {ECO:0000313|EMBL:ETI95555.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
amino acid permease
L3_058_072G1_scaffold_1005_22
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16306..16902)
DNA (597bp) protein (199aa)
Amino acid permease n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X340_9CLOT
Amino acid permease {ECO:0000313|EMBL:CDA10093.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
amino acid permease
L3_058_072G1_scaffold_1005_23
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17301..19136
DNA (1836bp) protein (612aa)
GTP-binding protein TypA n=2 Tax=Clostridiales RepID=B0ACB9_9FIRM
GTP-binding protein TypA {ECO:0000313|EMBL:EDQ96252.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
GTP-binding protein
L3_058_072G1_scaffold_1005_24
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19182..19586)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X5P6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA10090.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L3_058_072G1_scaffold_1005_25

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comp(19874..21031)
DNA (1158bp) protein (386aa)
Periplasmic binding protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACC1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ16756.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
ABC transporter substrate-binding protein
L3_058_072G1_scaffold_1005_26
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21049..21618)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ96255.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
Displaying 26 items

View Taxonomy