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L3_058_072G1_scaffold_1137

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_072G1_scaffold_1137_1
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..365
DNA (363bp) protein (121aa)
Tex-like protein N-terminal domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XA30_9CLOT
Tex-like protein N-terminal domain protein {ECO:0000313|EMBL:CDA09244.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
RNA-binding protein
L3_058_072G1_scaffold_1137_2
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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561..1739
DNA (1179bp) protein (393aa)
Amidohydrolase family protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X350_9CLOT
Amidohydrolase family protein {ECO:0000313|EMBL:CDA09245.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
putative hydrolase
L3_058_072G1_scaffold_1137_3
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2234..2848
DNA (615bp) protein (205aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0A7X5_9FIRM
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
riboflavin transporter
L3_058_072G1_scaffold_1137_4
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3035..3505
DNA (471bp) protein (157aa)
Hydrolase P-loop family n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XXL2_9CLOT
Hydrolase P-loop family {ECO:0000313|EMBL:CDA09247.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
ATP/GTP hydrolase
L3_058_072G1_scaffold_1137_5
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3505..4239
DNA (735bp) protein (245aa)
Universal bacterial protein YeaZ n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X0K9_9CLOT
Universal bacterial protein YeaZ {ECO:0000313|EMBL:CDA09248.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
peptidase
L3_058_072G1_scaffold_1137_6
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4276..4815
DNA (540bp) protein (180aa)
rimI; alanine acetyltransferase (EC:2.3.1.128)
Ribosomal-protein-alanine acetyltransferase n=2 Tax=Clostridium bartlettii CAG:1329 RepID=R5XA34_9CLOT
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:CDA09249.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L3_058_072G1_scaffold_1137_7
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4906..5922
DNA (1017bp) protein (339aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
gcp; putative O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=3 Tax=Clostridiales RepID=B0A7X1_9FIRM
L3_058_072G1_scaffold_1137_8
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5971..6315
DNA (345bp) protein (115aa)
Endoribonuclease L-PSP n=2 Tax=Clostridiales RepID=B0A7X0_9FIRM
Endoribonuclease L-PSP {ECO:0000313|EMBL:CDA09251.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
endoribonuclease L-PSP
L3_058_072G1_scaffold_1137_9
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6536..7264
DNA (729bp) protein (243aa)
SH3 domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XXL8_9CLOT
SH3 domain protein {ECO:0000313|EMBL:CDA09252.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
surface protein
L3_058_072G1_scaffold_1137_10
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7542..9458)
DNA (1917bp) protein (639aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X0L4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETI92769.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
ABC transporter ATP-binding protein
L3_058_072G1_scaffold_1137_11
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9599..10228
DNA (630bp) protein (210aa)
Redox-sensing transcriptional repressor Rex n=2 Tax=Clostridiales RepID=B0A7W7_9FIRM
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
redox-sensing transcriptional repressor Rex
L3_058_072G1_scaffold_1137_12
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10367..10537)
DNA (171bp) protein (57aa)
Ferredoxin n=2 Tax=Clostridiales RepID=B0A7W6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETI92767.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
4Fe-4S ferredoxin
L3_058_072G1_scaffold_1137_13
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10645..10815)
DNA (171bp) protein (57aa)
Ferredoxin n=2 Tax=Clostridiales RepID=B0A7W5_9FIRM
Ferredoxin {ECO:0000313|EMBL:EDQ97433.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
4Fe-4S ferredoxin
L3_058_072G1_scaffold_1137_14
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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11257..13146
DNA (1890bp) protein (630aa)
Carbon-monoxide dehydrogenase catalytic subunit n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XXM3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETI92765.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
oxidoreductase, acetyl-CoA synthase subunit
L3_058_072G1_scaffold_1137_15
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13169..13648
DNA (480bp) protein (160aa)
Nitrate reductase electron transfer subunit n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X0L9_9CLOT
Nitrate reductase electron transfer subunit {ECO:0000313|EMBL:CDA09258.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
oxidoreductase, electron transfer subunit
L3_058_072G1_scaffold_1137_16
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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13649..15007
DNA (1359bp) protein (453aa)
UPI0003D5F3D7 related cluster n=1 Tax=unknown RepID=UPI0003D5F3D7
Uncharacterized protein {ECO:0000313|EMBL:ETI92763.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
putative oxidoreductase, NAD/FAD bindingsubunit
L3_058_072G1_scaffold_1137_17
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(15499..15906)
DNA (408bp) protein (136aa)
UPI0003D5B2C4 related cluster n=1 Tax=unknown RepID=UPI0003D5B2C4
Uncharacterized protein {ECO:0000313|EMBL:ETI90305.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L3_058_072G1_scaffold_1137_18
unknown

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16196..16429
DNA (234bp) protein (78aa)

This feature has no annotations

L3_058_072G1_scaffold_1137_19
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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16449..16901
DNA (453bp) protein (151aa)
UPI0003D64AA3 related cluster n=1 Tax=unknown RepID=UPI0003D64AA3
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ETI92762.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
MarR family transcriptional regulator
L3_058_072G1_scaffold_1137_20
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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16910..17563
DNA (654bp) protein (218aa)
UPI0003D6670E related cluster n=1 Tax=unknown RepID=UPI0003D6670E
Uncharacterized protein {ECO:0000313|EMBL:ETI92761.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
hypothetical protein
L3_058_072G1_scaffold_1137_21
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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17636..18139
DNA (504bp) protein (168aa)
UPI0003D651AC related cluster n=1 Tax=unknown RepID=UPI0003D651AC
Uncharacterized protein {ECO:0000313|EMBL:ETI92760.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
N-acetyltransferase GCN5
L3_058_072G1_scaffold_1137_22
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18380..18622)
DNA (243bp) protein (81aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
UPI0003D62D44 related cluster n=1 Tax=unknown RepID=UPI0003D62D44
ferritin
L3_058_072G1_scaffold_1137_23

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comp(18689..19336)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7V9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ38624.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
Displaying 23 items

View Taxonomy