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L3_058_072G1_scaffold_66

Search features with annotation key words

Displaying items 1-30 of 126 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_072G1_scaffold_66_1
Enterobacter sp. MGH 14, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(271..936)
DNA (666bp) protein (222aa)
UPF0758 protein ENC_02570 n=7 Tax=Enterobacter cloacae complex RepID=D6DPA3_ENTCL
hypothetical protein
UPF0758 protein L360_00131 {ECO:0000256|HAMAP-Rule:MF_00018}; TaxID=1329823 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter sp. MGH 14.;"
L3_058_072G1_scaffold_66_2
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1107..2321
DNA (1215bp) protein (405aa)
Phosphopantothenate-cysteine ligase/Phosphopantothenoylcysteine decarboxylase (EC:4.1.1.36 6.3.2.5)
Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase {ECO:0000313|EMBL:KJP02264.1}; EC=4.1.1.36 {ECO:0000313|EMBL:KJP02264.1};; EC=6.3.2.5 {ECO:0000313|EMBL:KJP02264.1};; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
Phosphopantothenate-cysteine ligase /Phosphopantothenoylcysteine decarboxylase n=1 Tax=Enterobacter cloacae subsp. cloacae NCTC 9394 RepID=D6DPA4_ENTCL
L3_058_072G1_scaffold_66_3
Enterobacter sp. BIDMC 29, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2299..2757
DNA (459bp) protein (153aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=1329841 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter sp. BIDMC 29.;"
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=13 Tax=Enterobacter cloacae complex RepID=D6DPA5_ENTCL
L3_058_072G1_scaffold_66_4
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2879..3475
DNA (597bp) protein (199aa)
Nucleoid occlusion factor SlmA n=11 Tax=Enterobacter cloacae complex RepID=D6DPA6_ENTCL
slmA; division inhibitor protein
Nucleoid occlusion factor SlmA {ECO:0000256|HAMAP-Rule:MF_01839, ECO:0000256|SAAS:SAAS00010477}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
L3_058_072G1_scaffold_66_5
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3558..4199)
DNA (642bp) protein (214aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
Orotate phosphoribosyltransferase n=1 Tax=Enterobacter cloacae UCICRE 11 RepID=V3DC22_ENTCL
L3_058_072G1_scaffold_66_6
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4266..4982)
DNA (717bp) protein (239aa)
rph; ribonuclease PH (EC:2.7.7.56)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
Ribonuclease PH n=7 Tax=cellular organisms RepID=D6DPA8_ENTCL
L3_058_072G1_scaffold_66_7
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5108..5971
DNA (864bp) protein (288aa)
K+-transporting ATPase n=25 Tax=Enterobacteriaceae RepID=F5S3J1_9ENTR
hypothetical protein
Protein YicC {ECO:0000313|EMBL:CDL32298.1}; TaxID=1432556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae ISC8.;"
L3_058_072G1_scaffold_66_8
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6180..6797
DNA (618bp) protein (206aa)
Predicted membrane protein n=3 Tax=Enterobacter cloacae complex RepID=D6DPB0_ENTCL
membrane protein
Membrane protein {ECO:0000313|EMBL:KHC11864.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
L3_058_072G1_scaffold_66_9
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6824..9001)
DNA (2178bp) protein (726aa)
protein tyrosine kinase n=1 Tax=Enterobacter hormaechei RepID=UPI0002DE1475
Protein-tyrosine kinase {ECO:0000313|EMBL:KJX03823.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
protein-tyrosine kinase
L3_058_072G1_scaffold_66_10
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9024..9467)
DNA (444bp) protein (148aa)
Protein-tyrosine-phosphatase n=1 Tax=Enterobacter cloacae subsp. cloacae NCTC 9394 RepID=D6DPB2_ENTCL
protein tyrosine phosphatase
Protein tyrosine phosphatase {ECO:0000313|EMBL:KHC11866.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
L3_058_072G1_scaffold_66_11
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9455..10588)
DNA (1134bp) protein (378aa)
Periplasmic protein involved in polysaccharide export n=1 Tax=Enterobacter cloacae subsp. cloacae NCTC 9394 RepID=D6DPB3_ENTCL
Polysaccharide export protein Wza {ECO:0000313|EMBL:KJW86011.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
Periplasmic protein involved in polysaccharide export
L3_058_072G1_scaffold_66_12
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10632..12725)
DNA (2094bp) protein (698aa)
Bacterial putative lipoprotein (DUF940) n=1 Tax=Enterobacter cloacae subsp. cloacae NCTC 9394 RepID=D6DPB4_ENTCL
Bacterial putative lipoprotein (DUF940).
Membrane protein {ECO:0000313|EMBL:KHC11868.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
L3_058_072G1_scaffold_66_13
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12725..13462)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Enterobacter cloacae UCICRE 5 RepID=V3GSB9_ENTCL
Gramicidin synthase {ECO:0000313|EMBL:KJO62208.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
gramicidin synthase
L3_058_072G1_scaffold_66_14
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13459..14103)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Enterobacter cloacae UCICRE 11 RepID=V3F064_ENTCL
regulator
Regulator {ECO:0000313|EMBL:AJB60704.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
L3_058_072G1_scaffold_66_15
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14219..14515)
DNA (297bp) protein (99aa)
Uncharacterized protein n=2 Tax=Enterobacter cloacae RepID=V3DC12_ENTCL
membrane protein
Membrane protein {ECO:0000313|EMBL:AJB60703.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
L3_058_072G1_scaffold_66_16
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15220..16890)
DNA (1671bp) protein (557aa)
NAD-dependent DNA ligase (contains BRCT domain type II) (EC:6.5.1.2)
DNA ligase B {ECO:0000256|HAMAP-Rule:MF_01587, ECO:0000256|SAAS:SAAS00019096}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01587, ECO:0000256|SAAS:SAAS00019091};; Polydeoxyribonucleotide synthase [NAD(+)] B {ECO:0000256|HAMAP-Rule:MF_01587}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
DNA ligase B n=1 Tax=Enterobacter cloacae subsp. cloacae NCTC 9394 RepID=D6DPB6_ENTCL
L3_058_072G1_scaffold_66_17
Lelliottia amnigena, Lelliottia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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17141..17764
DNA (624bp) protein (208aa)
gmk; guanylate kinase (EC:2.7.4.8)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1439331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Lelliottia.;" source="Lelliottia amnigena CHS 78.;"
Guanylate kinase n=11 Tax=Enterobacter RepID=D6DPB7_ENTCL
L3_058_072G1_scaffold_66_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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17819..18094
DNA (276bp) protein (92aa)
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1005550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli EC1865.;"
DNA-directed RNA polymerase subunit omega n=2211 Tax=Bacteria RepID=RPOZ_CITK8
L3_058_072G1_scaffold_66_19
Enterobacter sp. MGH 14, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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18114..20228
DNA (2115bp) protein (705aa)
Bifunctional (P)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase n=6 Tax=Enterobacter cloacae complex RepID=I4ZG87_ENTCL
(p)ppGpp synthetase
Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase {ECO:0000313|EMBL:ERP05459.1}; TaxID=1329823 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter sp. MGH 14.;"
L3_058_072G1_scaffold_66_20
Enterobacter sp. MGH 14, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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20266..20922
DNA (657bp) protein (219aa)
tRNA guanosine-2'-O-methyltransferase (EC:2.1.1.34)
rRNA methylases n=12 Tax=cellular organisms RepID=D6DPB9_ENTCL
tRNA guanosine-2'-O-methyltransferase {ECO:0000313|EMBL:ERP05458.1}; TaxID=1329823 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter sp. MGH 14.;"
L3_058_072G1_scaffold_66_21
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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20926..23007
DNA (2082bp) protein (694aa)
ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG n=2 Tax=Enterobacter cloacae RepID=D6DPC0_ENTCL
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:KHC11876.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
L3_058_072G1_scaffold_66_22
Enterobacter hormaechei, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23011..24213)
DNA (1203bp) protein (401aa)
Sodium--glutamate symport carrier (GltS) n=5 Tax=Enterobacter cloacae complex RepID=D6DPC1_ENTCL
sodium:glutamate symporter
ESS family glutamate:sodium (Na+) symporter {ECO:0000313|EMBL:EGK57109.1}; TaxID=888063 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter hormaechei ATCC 49162.;"
L3_058_072G1_scaffold_66_23
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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24439..25830
DNA (1392bp) protein (464aa)
Uracil-xanthine permease n=6 Tax=Enterobacter cloacae complex RepID=D6DPC2_ENTCL
uracil-xanthine permease
Xanthine permease XanP {ECO:0000313|EMBL:KJP02285.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
L3_058_072G1_scaffold_66_24
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25949..27643
DNA (1695bp) protein (565aa)
hypothetical protein n=1 Tax=Enterobacter hormaechei RepID=UPI0002E7EF36
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJB60694.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
L3_058_072G1_scaffold_66_25
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(27772..30090)
DNA (2319bp) protein (773aa)
Alpha-xylosidase n=1 Tax=Enterobacter cloacae UCICRE 5 RepID=V3HBB7_ENTCL
Alpha-glucosidase {ECO:0000313|EMBL:KJN11519.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
alpha-glucosidase
L3_058_072G1_scaffold_66_26
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(30103..31494)
DNA (1392bp) protein (464aa)
Inner membrane symporter yicJ n=1 Tax=Enterobacter cloacae UCICRE 11 RepID=V3DUS5_ENTCL
transporter
Transporter {ECO:0000313|EMBL:AJB60692.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
L3_058_072G1_scaffold_66_27
unknown

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32309..32521
DNA (213bp) protein (71aa)

This feature has no annotations

L3_058_072G1_scaffold_66_28
Aeromonas salmonicida, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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32556..33734
DNA (1179bp) protein (393aa)
Retron reverse transcriptase n=1 Tax=Aeromonas veronii (strain B565) RepID=F4DH45_AERVB
retron reverse transcriptase
Retron reverse transcriptase {ECO:0000313|EMBL:EQC02762.1}; TaxID=1324960 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas salmonicida subsp. pectinolytica 34mel.;"
L3_058_072G1_scaffold_66_29
Aeromonas salmonicida, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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33731..33946
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa ATCC 14886 RepID=K1BTX7_PSEAI
Cold shock domain family protein {ECO:0000313|EMBL:EQC02763.1}; TaxID=1324960 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas salmonicida subsp. pectinolytica 34mel.;"
cold shock domain family protein
L3_058_072G1_scaffold_66_30
Enterobacter sp. 42324, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(33954..34145)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Enterobacter cloacae UCICRE 9 RepID=V3EYX6_ENTCL
repressor
Repressor {ECO:0000313|EMBL:KJM35911.1}; TaxID=1619249 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 42324.;"
Displaying items 1-30 of 126 in total

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