ggKbase home page

L3_058_072G1_scaffold_129

Search features with annotation key words

Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_072G1_scaffold_129_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..147
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 5521 RepID=B1R1W2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85212.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L3_058_072G1_scaffold_129_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(285..2111)
DNA (1827bp) protein (609aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
glmS; glutamine-fructose-6-phosphate transaminase (isomerizing) (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=4 Tax=Clostridium butyricum RepID=B1QZZ5_CLOBU
L3_058_072G1_scaffold_129_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2935..3966)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ACQ8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30554.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
S-layer protein
L3_058_072G1_scaffold_129_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4097..5413)
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A222_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30553.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L3_058_072G1_scaffold_129_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5548..8751)
DNA (3204bp) protein (1068aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AEI4_CLOBU
RND multidrug efflux transporter Acriflavin resistance protein {ECO:0000313|EMBL:KJZ87139.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative multidrug efflux pump, membrane protein
L3_058_072G1_scaffold_129_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8756..10006)
DNA (1251bp) protein (417aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YSF6_CLOBU
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ENZ30551.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
RND family efflux transporter MFP subunit
L3_058_072G1_scaffold_129_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10330..10815
DNA (486bp) protein (162aa)
MarR-family transcriptional regulator n=4 Tax=Clostridium butyricum RepID=B1QZY9_CLOBU
Transcriptional regulator, MarR family {ECO:0000313|EMBL:KJZ87237.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
MarR-family transcriptional regulator
L3_058_072G1_scaffold_129_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10874..11671)
DNA (798bp) protein (266aa)
Endonuclease/exonuclease/phosphatase family protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K1F8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87207.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
endonuclease/exonuclease/phosphatase family protein
L3_058_072G1_scaffold_129_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11677..13332)
DNA (1656bp) protein (552aa)
pts system, iibc component (EC:2.7.1.69)
Pts system, iibc component n=2 Tax=Clostridium butyricum RepID=M8JES7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87189.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L3_058_072G1_scaffold_129_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13459..15132)
DNA (1674bp) protein (558aa)
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AEH8_CLOBU
glycosyl hydrolase family protein
L3_058_072G1_scaffold_129_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15398..16399)
DNA (1002bp) protein (334aa)
Transcriptional regulator, LacI family n=4 Tax=Clostridium butyricum RepID=B1QZY5_CLOBU
Maltose operon transcriptional repressor MalR, LacI family {ECO:0000313|EMBL:KJZ87202.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
alanine racemase
L3_058_072G1_scaffold_129_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16648..18210)
DNA (1563bp) protein (521aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
malQ1; 4-alpha-glucanotransferase MalQ (EC:2.4.1.25)
4-alpha-glucanotransferase n=2 Tax=Clostridium butyricum RepID=B1QZY4_CLOBU
L3_058_072G1_scaffold_129_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18399..19301)
DNA (903bp) protein (301aa)
Sugar ABC transporter, permease protein n=2 Tax=Clostridium butyricum RepID=B1QZY3_CLOBU
ABC transporter, permease protein {ECO:0000313|EMBL:EEP55094.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
binding-protein-dependent transport systems inner membrane component
L3_058_072G1_scaffold_129_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19301..20167)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A210_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30543.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
binding-protein-dependent transport system inner membrane protein
L3_058_072G1_scaffold_129_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20263..21579)
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AEH3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30542.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
extracellular solute-binding protein
L3_058_072G1_scaffold_129_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21909..22169)
DNA (261bp) protein (87aa)
GIY-YIG domain protein n=2 Tax=Clostridium butyricum RepID=B1QZY0_CLOBU
Excinuclease ABC, C subunit domain protein {ECO:0000313|EMBL:EEP55693.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
putative endonuclease containing a URI domain
L3_058_072G1_scaffold_129_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22381..24042)
DNA (1662bp) protein (554aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ilvB1; acetolactate synthase large subunit (EC:2.2.1.6)
Acetolactate synthase, large subunit, biosynthetic type n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YSY2_CLOBU
L3_058_072G1_scaffold_129_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24210..25868)
DNA (1659bp) protein (553aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=4 Tax=Clostridium butyricum RepID=B1QZX8_CLOBU
L3_058_072G1_scaffold_129_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25875..26957)
DNA (1083bp) protein (361aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
leuB; 3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=4 Tax=Clostridium butyricum RepID=B1QZX7_CLOBU
L3_058_072G1_scaffold_129_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27149..27634)
DNA (486bp) protein (162aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
leuD; 3-isopropylmalate dehydratase small subunit LeuD (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=4 Tax=Clostridium butyricum RepID=B1QZX6_CLOBU
L3_058_072G1_scaffold_129_21
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27648..28907)
DNA (1260bp) protein (420aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
leuC2; 3-isopropylmalate dehydratase large subunit LeuC (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=2 Tax=Clostridium butyricum RepID=M8J5X1_CLOBU
L3_058_072G1_scaffold_129_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28922..30517)
DNA (1596bp) protein (532aa)
AIPM/hcit synthase family transferase (EC:2.3.3.-)
2-isopropylmalate synthase/homocitrate synthase family protein n=2 Tax=Clostridium butyricum RepID=B1QZX4_CLOBU
2-isopropylmalate synthase/homocitrate synthase family protein {ECO:0000313|EMBL:EEP55254.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
L3_058_072G1_scaffold_129_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30630..31136)
DNA (507bp) protein (169aa)
Acetolactate synthase small subunit {ECO:0000313|EMBL:KJZ87179.1}; EC=2.2.1.6 {ECO:0000313|EMBL:KJZ87179.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ilvH; acetolactate synthase small subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit n=2 Tax=Clostridium butyricum RepID=M8K1H5_CLOBU
L3_058_072G1_scaffold_129_24
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31659..32063)
DNA (405bp) protein (135aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JET9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87208.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L3_058_072G1_scaffold_129_25
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32243..33589)
DNA (1347bp) protein (449aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
Phosphoglucosamine mutase n=2 Tax=Clostridium butyricum RepID=M8JG57_CLOBU
glmM; phosphoglucosamine mutase
L3_058_072G1_scaffold_129_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33839..34153)
DNA (315bp) protein (105aa)
TrpR-like protein YerC/YecD n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YSD8_CLOBU
TrpR-like protein YerC/YecD {ECO:0000313|EMBL:ENZ30531.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
TrpR like protein, YerC/YecD
L3_058_072G1_scaffold_129_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34246..35082)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YSX4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30530.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
HTH DNA-binding protein
L3_058_072G1_scaffold_129_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35258..37504)
DNA (2247bp) protein (749aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ACN2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30529.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
peptidase M56, BlaR1
L3_058_072G1_scaffold_129_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37538..39772)
DNA (2235bp) protein (745aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A1Z2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30528.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
beta-lactamase regulatory protein 1
L3_058_072G1_scaffold_129_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39801..40193)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AEF6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30527.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
penicillinase repressor
Displaying items 1-30 of 91 in total

View Taxonomy