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L3_058_072G1_scaffold_133

Search features with annotation key words

Displaying items 1-30 of 99 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_072G1_scaffold_133_1
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..436)
DNA (435bp) protein (145aa)
UPF0210 protein HMPREF9282_01133 n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9DHD6_9FIRM
UPF0210 protein HMPREF1633_04075 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
hypothetical protein
L3_058_072G1_scaffold_133_2
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(445..717)
DNA (273bp) protein (91aa)
UPI0003D5D5EC related cluster n=1 Tax=unknown RepID=UPI0003D5D5EC
UPF0237 protein Q612_NSC00183G0002 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
ACT domain-containing protein
L3_058_072G1_scaffold_133_3
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

859..1620
DNA (762bp) protein (254aa)
UPI0003D5D4CF related cluster n=1 Tax=unknown RepID=UPI0003D5D4CF
Exodeoxyribonuclease III {ECO:0000313|EMBL:ETI88908.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
exodeoxyribonuclease III Xth
L3_058_072G1_scaffold_133_4
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1638..3251
DNA (1614bp) protein (538aa)
UPI0003D656D2 related cluster n=1 Tax=unknown RepID=UPI0003D656D2
Uncharacterized protein {ECO:0000313|EMBL:ETI86413.1}; Flags: Fragment;; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L3_058_072G1_scaffold_133_5
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3251..3940
DNA (690bp) protein (230aa)
Uncharacterized protein n=2 Tax=Megasphaera RepID=D3LTK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF11717.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
hypothetical protein
L3_058_072G1_scaffold_133_6
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3950..4777)
DNA (828bp) protein (276aa)
UPI0003D6724F related cluster n=1 Tax=unknown RepID=UPI0003D6724F
ExsB family protein {ECO:0000313|EMBL:ETI86415.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
NAD synthetase
L3_058_072G1_scaffold_133_7
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4752..5906)
DNA (1155bp) protein (385aa)
UPI0003D5972E related cluster n=1 Tax=unknown RepID=UPI0003D5972E
Uncharacterized protein {ECO:0000313|EMBL:KGF11716.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
ribulose bisphosphate carboxylase large chain
L3_058_072G1_scaffold_133_8
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6011..6520
DNA (510bp) protein (170aa)
UPI0003D66A85 related cluster n=1 Tax=unknown RepID=UPI0003D66A85
Thiol peroxidase {ECO:0000313|EMBL:ETI86417.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
redoxin
L3_058_072G1_scaffold_133_9
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6633..7799
DNA (1167bp) protein (389aa)
UPI0003D68948 related cluster n=1 Tax=unknown RepID=UPI0003D68948
Aspartate transaminase {ECO:0000313|EMBL:ETI86418.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
aspartate transaminase
L3_058_072G1_scaffold_133_10
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7911..8903
DNA (993bp) protein (331aa)
UPI0003D680C9 related cluster n=1 Tax=unknown RepID=UPI0003D680C9
Beta-lactamase protein {ECO:0000313|EMBL:ETI86419.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
beta-lactamase
L3_058_072G1_scaffold_133_11
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8858..9955
DNA (1098bp) protein (366aa)
UPI0003D619FE related cluster n=1 Tax=unknown RepID=UPI0003D619FE
Protease DegQ {ECO:0000313|EMBL:ETI86420.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
trypsin
L3_058_072G1_scaffold_133_12
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9955..10434
DNA (480bp) protein (160aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D67359 related cluster n=1 Tax=unknown RepID=UPI0003D67359
hypothetical protein
L3_058_072G1_scaffold_133_13
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10446..11699
DNA (1254bp) protein (418aa)
UPI0003D62BC1 related cluster n=1 Tax=unknown RepID=UPI0003D62BC1
Uncharacterized protein {ECO:0000313|EMBL:ETI86422.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L3_058_072G1_scaffold_133_14
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11710..12591
DNA (882bp) protein (294aa)
UPI0003D5AD37 related cluster n=1 Tax=unknown RepID=UPI0003D5AD37
Uncharacterized protein {ECO:0000313|EMBL:KGF11710.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
Zn-dependent protease
L3_058_072G1_scaffold_133_15
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12643..13110
DNA (468bp) protein (156aa)
UPI0003D637D1 related cluster n=1 Tax=unknown RepID=UPI0003D637D1
Uncharacterized protein {ECO:0000313|EMBL:ETI86425.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
signal transduction protein with CBS domains
L3_058_072G1_scaffold_133_16
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13186..13965)
DNA (780bp) protein (260aa)
UPI0003D64A18 related cluster n=1 Tax=unknown RepID=UPI0003D64A18
4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme {ECO:0000313|EMBL:ETI86426.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
DJ-1 family protein
L3_058_072G1_scaffold_133_17
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14086..14691
DNA (606bp) protein (202aa)
UPI0003D5E96D related cluster n=1 Tax=unknown RepID=UPI0003D5E96D
Methenyltetrahydrofolate cyclohydrolase {ECO:0000313|EMBL:ETI86427.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
formiminotransferase-cyclodeaminase
L3_058_072G1_scaffold_133_18
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14783..15229
DNA (447bp) protein (149aa)
UPI0003D66334 related cluster n=1 Tax=unknown RepID=UPI0003D66334
Outer membrane protein, OmpH-like protein {ECO:0000313|EMBL:ETI86428.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
outer membrane chaperone Skp
L3_058_072G1_scaffold_133_19
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15515..16348
DNA (834bp) protein (278aa)
UPI0003D652B5 related cluster n=1 Tax=unknown RepID=UPI0003D652B5
Pur operon repressor PurR {ECO:0000313|EMBL:ETI86429.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
purine operon repressor, PurR
L3_058_072G1_scaffold_133_20
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16341..17711
DNA (1371bp) protein (457aa)
UPI0003D63C2A related cluster n=1 Tax=unknown RepID=UPI0003D63C2A
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
bifunctional protein glmU
L3_058_072G1_scaffold_133_21
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17725..18678
DNA (954bp) protein (318aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D5BA62 related cluster n=1 Tax=unknown RepID=UPI0003D5BA62
ribose-phosphate pyrophosphokinase
L3_058_072G1_scaffold_133_22
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18688..19263
DNA (576bp) protein (192aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D63F5C related cluster n=1 Tax=unknown RepID=UPI0003D63F5C
peptidyl-tRNA hydrolase
L3_058_072G1_scaffold_133_23
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19347..19544
DNA (198bp) protein (66aa)
UPI0003D692FB related cluster n=1 Tax=unknown RepID=UPI0003D692FB
Uncharacterized protein {ECO:0000313|EMBL:ETI86433.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L3_058_072G1_scaffold_133_24
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19602..20066
DNA (465bp) protein (155aa)
UPI0003D5A4BB related cluster n=1 Tax=unknown RepID=UPI0003D5A4BB
Hydrolase {ECO:0000313|EMBL:ETI86434.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hydrolase
L3_058_072G1_scaffold_133_25
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20063..20404
DNA (342bp) protein (114aa)
UPI0003D64D34 related cluster n=1 Tax=unknown RepID=UPI0003D64D34
Arsenate reductase-like protein {ECO:0000313|EMBL:ETI86435.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
Arsenate reductase-like protein
L3_058_072G1_scaffold_133_26
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20401..21078
DNA (678bp) protein (226aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D6047B related cluster n=1 Tax=unknown RepID=UPI0003D6047B
thymidylate kinase
L3_058_072G1_scaffold_133_27
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21122..22126)
DNA (1005bp) protein (335aa)
UPI0003D599A6 related cluster n=1 Tax=unknown RepID=UPI0003D599A6
Uncharacterized protein {ECO:0000313|EMBL:ETI86437.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L3_058_072G1_scaffold_133_28
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22291..23145
DNA (855bp) protein (285aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D63686 related cluster n=1 Tax=unknown RepID=UPI0003D63686
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
L3_058_072G1_scaffold_133_29
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23142..23876
DNA (735bp) protein (245aa)
UPI0003D64A05 related cluster n=1 Tax=unknown RepID=UPI0003D64A05
FCD protein {ECO:0000313|EMBL:ETI86439.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
FCD domain protein
L3_058_072G1_scaffold_133_30
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23873..24370
DNA (498bp) protein (166aa)
UPI0003D5EAFB related cluster n=1 Tax=unknown RepID=UPI0003D5EAFB
Hydrolase {ECO:0000313|EMBL:ETI86440.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hydrolase
Displaying items 1-30 of 99 in total

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