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L3_058_072G1_scaffold_165

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_072G1_scaffold_165_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(254..760)
DNA (507bp) protein (169aa)
Small multidrug export protein n=4 Tax=Clostridium RepID=E7GKI2_CLOSY
Small multidrug export protein {ECO:0000313|EMBL:EGA94634.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Predicted membrane protein
L3_058_072G1_scaffold_165_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(769..1239)
DNA (471bp) protein (157aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9STR9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94635.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_058_072G1_scaffold_165_3
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1338..3689)
DNA (2352bp) protein (784aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9STR8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF04739.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_058_072G1_scaffold_165_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3664..4563)
DNA (900bp) protein (300aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium symbiosum RepID=E9STR7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94637.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
ABC-type multidrug transport system, ATPase component
L3_058_072G1_scaffold_165_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4556..5092)
DNA (537bp) protein (179aa)
GntR family Transcriptional regulator n=2 Tax=Clostridium symbiosum RepID=E7GKI6_CLOSY
GntR family Transcriptional regulator {ECO:0000313|EMBL:EGA94638.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
transcriptional regulator, GntR family
L3_058_072G1_scaffold_165_6
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5243..5551)
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=2 Tax=Clostridium RepID=E7GKI7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94639.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_058_072G1_scaffold_165_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5761..6516)
DNA (756bp) protein (252aa)
Putative uncharacterized protein n=2 Tax=Clostridium RepID=E7GKI8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94640.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_058_072G1_scaffold_165_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6518..8092)
DNA (1575bp) protein (525aa)
Putative uncharacterized protein n=2 Tax=Clostridium symbiosum RepID=E7GKI9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94641.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Predicted DNA-binding protein with the Helix-hairpin-helix motif
L3_058_072G1_scaffold_165_9
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8454..9485)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9STR2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94642.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_058_072G1_scaffold_165_10
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9501..10946)
DNA (1446bp) protein (482aa)
Citrate transporter n=3 Tax=Clostridium RepID=E9STR1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF04731.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
transporter, UIT6 family (TC 9.B.53)
L3_058_072G1_scaffold_165_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11428..12528)
DNA (1101bp) protein (367aa)
UDP-galactose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=4 Tax=Clostridium RepID=U2BM33_CLOSY
UDP-glucose 4-epimerase {ECO:0000313|EMBL:ERI79194.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_058_072G1_scaffold_165_12
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12528..12710)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2C597_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI79193.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_058_072G1_scaffold_165_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12694..13323)
DNA (630bp) protein (210aa)
RNA polymerase sigma factor n=4 Tax=Clostridium RepID=E7GKJ3_CLOSY
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
FliA/WhiG family RNA polymerase sigma factor
L3_058_072G1_scaffold_165_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13537..14343)
DNA (807bp) protein (269aa)
Guanosine monophosphate synthetase GuaA n=3 Tax=Clostridium RepID=E7GKJ4_CLOSY
Guanosine monophosphate synthetase GuaA {ECO:0000313|EMBL:EGA94646.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
N-acetyltransferase
L3_058_072G1_scaffold_165_15
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14345..14803)
DNA (459bp) protein (153aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9STQ7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94647.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_058_072G1_scaffold_165_16
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14805..15050)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2C593_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI79188.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_058_072G1_scaffold_165_17
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15375..17630)
DNA (2256bp) protein (752aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GKJ6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94648.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_058_072G1_scaffold_165_18
unknown

Not on your lists

comp(17920..18030)
DNA (111bp) protein (37aa)

This feature has no annotations

L3_058_072G1_scaffold_165_19
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18027..18704)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9J619_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS29446.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
purU; formyltetrahydrofolate hydrolase
L3_058_072G1_scaffold_165_20
Eggerthella sp. CAG:368, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18701..19417)
DNA (717bp) protein (239aa)
WbnG protein n=1 Tax=Eggerthella sp. CAG:368 RepID=R7BQ06_9ACTN
WbnG protein {ECO:0000313|EMBL:CDD67911.1}; TaxID=1262877 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:368.;"
hypothetical protein
L3_058_072G1_scaffold_165_21
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19462..20565)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=R7B1W2_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EEC55923.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
DegT/DnrJ/EryC1/StrS aminotransferase
L3_058_072G1_scaffold_165_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20562..22028)
DNA (1467bp) protein (489aa)
UPI0003D6990C related cluster n=1 Tax=unknown RepID=UPI0003D6990C
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ETI91187.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
polysaccharide biosynthesis protein
L3_058_072G1_scaffold_165_23
Planomicrobium sp. ES2, Planomicrobium, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22021..22995)
DNA (975bp) protein (325aa)
Putative glycosyltransferase n=1 Tax=Planococcus halocryophilus Or1 RepID=M3CW14_9BACL
Putative glycosyltransferase EpsE {ECO:0000313|EMBL:CEG22104.1}; TaxID=1499687 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Planomicrobium.;" source="Planomicrobium sp. ES2.;"
glycosyl transferase family protein
L3_058_072G1_scaffold_165_24
Acinetobacter pittii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23013..24257)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Acinetobacter pittii ANC 4050 RepID=R8YBF6_ACIPI
Uncharacterized protein {ECO:0000313|EMBL:EOQ66738.1}; TaxID=1217691 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii complex.;" source="Acinetobacter pittii ANC 4050.;"
hypothetical protein
L3_058_072G1_scaffold_165_25
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24297..25094)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5NHU1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ03730.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
hypothetical protein
L3_058_072G1_scaffold_165_26
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25113..26399)
DNA (1287bp) protein (429aa)
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
UDP-glucose 6-dehydrogenase n=1 Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CSE4_THEYO
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:ERM92709.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. yonseiensis KB-1.;"
L3_058_072G1_scaffold_165_27
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26441..27205)
DNA (765bp) protein (255aa)
Glycosyl transferase family 2 n=1 Tax=Bacillus thuringiensis subsp. finitimus (strain YBT-020) RepID=F0PU58_BACT0
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADY24477.1}; TaxID=930170 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus thuringiensis subsp. finitimus (strain YBT-020).;"
L3_058_072G1_scaffold_165_28
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27192..28694)
DNA (1503bp) protein (501aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FFT5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF04710.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
L3_058_072G1_scaffold_165_29
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28666..28866)
DNA (201bp) protein (67aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FFT4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF04709.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_058_072G1_scaffold_165_30
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28895..29470)
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FFT3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF04708.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Transcription antiterminator
Displaying items 1-30 of 77 in total

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