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L3_058_072G1_scaffold_256

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_072G1_scaffold_256_1
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..132)
DNA (132bp) protein (44aa)
50S ribosomal protein L20 n=1 Tax=Cronobacter malonaticus 681 RepID=K8BU19_9ENTR
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1194150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Litchfield str.; CFSAN001076.;"
L3_058_072G1_scaffold_256_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(369..752)
DNA (384bp) protein (128aa)
Translation initiation factor IF-3 n=1320 Tax=Enterobacteriaceae RepID=E2QMS8_ECOLX
translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1438695 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UCI 65.;"
L3_058_072G1_scaffold_256_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(864..2792)
DNA (1929bp) protein (643aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase {ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|SAAS:SAAS00106033};; TaxID=566546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666; / NRRL B-766 / W).;"
Threonine--tRNA ligase n=104 Tax=Escherichia RepID=D2NIZ5_ECOS5
L3_058_072G1_scaffold_256_4
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3316..3603
DNA (288bp) protein (96aa)
Uncharacterized protein n=27 Tax=Escherichia RepID=D2NIZ6_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC79025.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
L3_058_072G1_scaffold_256_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4511..4618
DNA (108bp) protein (36aa)
Putative uncharacterized protein n=1 Tax=Escherichia coli EC4100B RepID=E7UR35_ECOLX
yniD; small predicted membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EOV97921.1}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
L3_058_072G1_scaffold_256_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4671..5429)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1146 Tax=Enterobacteriaceae RepID=C3T7N7_ECOLX
hypothetical protein
Salt-induced outer membrane protein {ECO:0000313|EMBL:EQP55171.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_058_072G1_scaffold_256_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5715..6644
DNA (930bp) protein (310aa)
6-phosphofructokinase (EC:2.7.1.11)
Phosphofructokinase n=50 Tax=Escherichia RepID=D2NJ01_ECOS5
Phosphofructokinase {ECO:0000256|PIRNR:PIRNR000535}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
L3_058_072G1_scaffold_256_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6745..7035
DNA (291bp) protein (97aa)
Uncharacterized protein n=216 Tax=Escherichia coli RepID=D2NJ02_ECOS5
ydiZ; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI55126.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
L3_058_072G1_scaffold_256_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7141..8001
DNA (861bp) protein (287aa)
Uncharacterized protein yniA n=515 Tax=Enterobacteriaceae RepID=E2QMT4_ECOLX
putative phosphotransferase/kinase
Fructosamine kinase {ECO:0000313|EMBL:ESD90529.1}; TaxID=1268998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908573.;"
L3_058_072G1_scaffold_256_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8042..8578)
DNA (537bp) protein (179aa)
Uncharacterized protein n=681 Tax=Enterobacteriaceae RepID=J7R1P9_ECOLX
hypothetical protein
YniB-like family protein {ECO:0000313|EMBL:ENB13409.1}; TaxID=1116036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2875150.;"
L3_058_072G1_scaffold_256_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8725..9393
DNA (669bp) protein (223aa)
HAD-superfamily hydrolase, subfamily IA n=266 Tax=Escherichia RepID=D5D3X8_ECOKI
2-deoxyglucose-6-phosphatase
2-deoxyglucose-6-phosphatase {ECO:0000313|EMBL:EYZ92122.1}; TaxID=1446551 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O119:H4 str. 03-3458.;"
L3_058_072G1_scaffold_256_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9557..10147
DNA (591bp) protein (197aa)
Inner membrane protein ydjM n=908 Tax=Enterobacteriaceae RepID=C3T7K7_ECOLX
inner membrane protein
Inner membrane protein ydjM {ECO:0000313|EMBL:EMX19570.1}; TaxID=1116066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.1.;"
L3_058_072G1_scaffold_256_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10280..11671
DNA (1392bp) protein (464aa)
Uncharacterized symporter ydjN n=265 Tax=Escherichia RepID=E2QMT8_ECOLX
sodium:dicarboxylate symporter YdjN
Uncharacterized protein {ECO:0000313|EMBL:BAI55131.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
L3_058_072G1_scaffold_256_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11718..11981)
DNA (264bp) protein (88aa)
Cell division modulator n=327 Tax=Escherichia RepID=B7MVL0_ECO81
cedA; cell division modulator
Cell division activator CedA {ECO:0000256|HAMAP-Rule:MF_01580}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
L3_058_072G1_scaffold_256_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12164..14425
DNA (2262bp) protein (754aa)
katE; hydroperoxidase II (EC:1.11.1.6)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
Catalase n=4 Tax=Escherichia coli RepID=L3XET9_ECOLX
L3_058_072G1_scaffold_256_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14472..15230)
DNA (759bp) protein (253aa)
Chitooligosaccharide deacetylase {ECO:0000256|HAMAP-Rule:MF_01246}; Short=COD {ECO:0000256|HAMAP-Rule:MF_01246};; EC=3.5.1.105 {ECO:0000256|HAMAP-Rule:MF_01246};; Chitin disaccharide deacetylase {ECO:0000256|HAMAP-Rule:MF_01246}; Chitobiose deacetylase {ECO:0000256|HAMAP-Rule:MF_01246}; Chitobiose-6P deacetylase {ECO:0000256|HAMAP-Rule:MF_01246}; Chitotriose deacetylase {ECO:0000256|HAMAP-Rule:MF_01246}; Chitotriose-6P deacetylase {ECO:0000256|HAMAP-Rule:MF_01246}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
UPF0249 protein ChbG n=36 Tax=Escherichia coli RepID=D2NJ10_ECOS5
hypothetical protein
L3_058_072G1_scaffold_256_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15243..16595)
DNA (1353bp) protein (451aa)
Phospho-beta-glucosidase n=276 Tax=Escherichia coli RepID=C3T7H7_ECOLX
phospho-beta-glucosidase
Phospho-beta-glucosidase cryptic {ECO:0000313|EMBL:AAG56720.1}; TaxID=83334 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:H7.;"
L3_058_072G1_scaffold_256_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16698..17537)
DNA (840bp) protein (280aa)
HTH-type transcriptional regulator chbR n=295 Tax=Escherichia RepID=E2QMU3_ECOLX
transcriptional repressor of carbon uptake
HTH-type transcriptional regulator ChbR (Chb operon repressor) {ECO:0000313|EMBL:EGI50654.1}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
L3_058_072G1_scaffold_256_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17548..17898)
DNA (351bp) protein (117aa)
N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIA component {ECO:0000313|EMBL:KDY61943.1}; EC=2.7.1.- {ECO:0000313|EMBL:KDY61943.1};; TaxID=1444155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C2.;"
N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIA component n=1085 Tax=Enterobacteriaceae RepID=PTQA_ECO57
PTS system cellobiose-specific IIA component
L3_058_072G1_scaffold_256_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17949..19307)
DNA (1359bp) protein (453aa)
PTS system, cellobiose-specific IIC component n=315 Tax=Escherichia RepID=A1ABR8_ECOK1
celB; PTS system N,N'-diacetylchitobiose-specific transporter subunit IIC
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
L3_058_072G1_scaffold_256_21
Escherichia sp. KTE159, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19392..19712)
DNA (321bp) protein (107aa)
N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIB component n=1368 Tax=Enterobacteriaceae RepID=PTQB_ECO57
celA; PTS system protein
N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIB component {ECO:0000313|EMBL:EOW66276.1}; TaxID=1182732 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE159.;"
L3_058_072G1_scaffold_256_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20011..20349)
DNA (339bp) protein (113aa)
Osmotically-inducible lipoprotein E n=381 Tax=Escherichia RepID=E2QMU7_ECOLX
osmE; Osmotically-inducible lipoprotein E
SmpA / OmlA family protein {ECO:0000313|EMBL:EZJ51635.1}; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
L3_058_072G1_scaffold_256_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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20551..21378
DNA (828bp) protein (276aa)
NAD synthetase {ECO:0000313|EMBL:AJO83672.1}; EC=6.3.1.5 {ECO:0000313|EMBL:AJO83672.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
NH(3)-dependent NAD(+) synthetase n=38 Tax=Escherichia coli RepID=D2NJ17_ECOS5
NAD synthetase
L3_058_072G1_scaffold_256_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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21608..22495
DNA (888bp) protein (296aa)
Excinuclease n=32 Tax=Escherichia coli RepID=D2NJ18_ECOS5
excinuclease
Cho protein; Excinuclease cho {ECO:0000313|EMBL:CDN82244.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
L3_058_072G1_scaffold_256_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22455..23030)
DNA (576bp) protein (192aa)
Protein Ves n=296 Tax=Escherichia RepID=VES_ECO45
ydjR; hypothetical protein
Protein Ves {ECO:0000256|HAMAP-Rule:MF_01591}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
L3_058_072G1_scaffold_256_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23233..23718)
DNA (486bp) protein (162aa)
Spheroplast protein Y n=288 Tax=Escherichia RepID=E2QMV1_ECOLX
hypothetical protein
Spheroplast protein {ECO:0000313|EMBL:BAI55144.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
L3_058_072G1_scaffold_256_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24048..25016)
DNA (969bp) protein (323aa)
Succinylglutamate desuccinylase {ECO:0000256|HAMAP-Rule:MF_00767, ECO:0000256|SAAS:SAAS00036677}; EC=3.5.1.96 {ECO:0000256|HAMAP-Rule:MF_00767, ECO:0000256|SAAS:SAAS00036667};; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
Succinylglutamate desuccinylase n=38 Tax=Escherichia coli RepID=D2NJ21_ECOS5
succinylglutamate desuccinylase
L3_058_072G1_scaffold_256_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25009..26352)
DNA (1344bp) protein (448aa)
succinylarginine dihydrolase (EC:3.5.3.23)
N-succinylarginine dihydrolase {ECO:0000256|HAMAP-Rule:MF_01172, ECO:0000256|SAAS:SAAS00074425}; EC=3.5.3.23 {ECO:0000256|HAMAP-Rule:MF_01172, ECO:0000256|SAAS:SAAS00074418};; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
N-succinylarginine dihydrolase n=41 Tax=Escherichia RepID=D2NJ22_ECOS5
L3_058_072G1_scaffold_256_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26349..27827)
DNA (1479bp) protein (493aa)
astD; Succinylglutamic semialdehyde dehydrogenase (EC:1.2.1.71)
N-succinylglutamate 5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01174}; EC=1.2.1.71 {ECO:0000256|HAMAP-Rule:MF_01174};; Succinylglutamic semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01174}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
N-succinylglutamate 5-semialdehyde dehydrogenase n=47 Tax=Escherichia coli RepID=D2NJ23_ECOS5
L3_058_072G1_scaffold_256_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(27824..28858)
DNA (1035bp) protein (345aa)
Arginine N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_01171, ECO:0000256|SAAS:SAAS00075375}; Short=AST {ECO:0000256|HAMAP-Rule:MF_01171};; EC=2.3.1.109 {ECO:0000256|HAMAP-Rule:MF_01171, ECO:0000256|SAAS:SAAS00075375};; AOST {ECO:0000256|HAMAP-Rule:MF_01171}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
Arginine N-succinyltransferase n=38 Tax=Escherichia coli RepID=D2NJ24_ECOS5
arginine succinyltransferase
Displaying items 1-30 of 61 in total

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