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L3_058_072G1_scaffold_294

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_072G1_scaffold_294_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

295..990
DNA (696bp) protein (232aa)
Response regulator receiver domain protein n=4 Tax=Clostridium RepID=E9SIA6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92194.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_058_072G1_scaffold_294_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1015..3369
DNA (2355bp) protein (785aa)
Sensor histidine kinase n=2 Tax=Clostridium symbiosum RepID=E7GSQ3_CLOSY
Sensor histidine kinase {ECO:0000313|EMBL:EGA92193.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Signal transduction histidine kinase
L3_058_072G1_scaffold_294_3
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3421..4833
DNA (1413bp) protein (471aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FEK7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF05125.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
algI; alginate O-acetylation protein algI
L3_058_072G1_scaffold_294_4
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4852..5955
DNA (1104bp) protein (368aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FEK6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF05124.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
alginate O-acetyltransferase AlgJ
L3_058_072G1_scaffold_294_5
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6134..6988)
DNA (855bp) protein (285aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FEK5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF05123.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
N-acetyltransferase GCN5
L3_058_072G1_scaffold_294_6
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7149..8378)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2B6L7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI73779.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L3_058_072G1_scaffold_294_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8412..9800)
DNA (1389bp) protein (463aa)
MATE efflux family protein n=4 Tax=Clostridium RepID=E7GSP8_CLOSY
MATE efflux family protein {ECO:0000313|EMBL:EGA92188.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
putative efflux protein, MATE family
L3_058_072G1_scaffold_294_8
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10132..11310)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2CX28_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05120.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_058_072G1_scaffold_294_9
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11337..12527)
DNA (1191bp) protein (397aa)
amidohydrolase (EC:3.5.1.-)
Thermostable carboxypeptidase 1 n=4 Tax=Clostridium RepID=E7GSP5_CLOSY
Thermostable carboxypeptidase 1 {ECO:0000313|EMBL:EGA92185.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_058_072G1_scaffold_294_10
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13143..14900
DNA (1758bp) protein (586aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=2 Tax=Clostridium symbiosum RepID=E7GSP4_CLOSY
L3_058_072G1_scaffold_294_11
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14987..16255
DNA (1269bp) protein (423aa)
Imidazolonepropionase {ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|SAAS:SAAS00083112};; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
imidazolonepropionase (EC:3.5.2.7)
Imidazolonepropionase n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FEJ9_9CLOT
L3_058_072G1_scaffold_294_12
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16246..16812
DNA (567bp) protein (189aa)
formiminotetrahydrofolate cyclodeaminase (EC:4.3.1.4)
Formiminotransferase-cyclodeaminase n=3 Tax=Clostridium RepID=U2D2M0_CLOSY
Formiminotransferase-cyclodeaminase {ECO:0000313|EMBL:ERI73771.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_058_072G1_scaffold_294_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16890..17768
DNA (879bp) protein (293aa)
glutamate formiminotransferase (EC:2.1.2.5)
Glutamate formiminotransferase n=4 Tax=Clostridium RepID=E7GSP1_CLOSY
Glutamate formimidoyltransferase {ECO:0000313|EMBL:ERI73770.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_058_072G1_scaffold_294_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17891..18778)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2B6K7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI73769.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L3_058_072G1_scaffold_294_15
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18859..19401)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BPP0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI73768.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L3_058_072G1_scaffold_294_16
unknown

Not on your lists

comp(19511..19615)
DNA (105bp) protein (35aa)

This feature has no annotations

L3_058_072G1_scaffold_294_17
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19615..22521)
DNA (2907bp) protein (969aa)
Tetratricopeptide repeat protein n=2 Tax=Clostridium symbiosum RepID=E9SI91_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92258.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
DNA-binding transcriptional activator of the SARP family
L3_058_072G1_scaffold_294_18
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22677..23606)
DNA (930bp) protein (310aa)
Sensory box/GGDEF domain-containing protein n=2 Tax=Clostridium symbiosum RepID=E7GSN8_CLOSY
Sensory box/GGDEF domain-containing protein {ECO:0000313|EMBL:EGA92257.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
signaling protein
L3_058_072G1_scaffold_294_19
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23881..25401
DNA (1521bp) protein (507aa)
Histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hutH; histidine ammonia-lyase (EC:4.3.1.3)
Histidine ammonia-lyase n=3 Tax=Clostridium symbiosum RepID=E7GSN7_CLOSY
L3_058_072G1_scaffold_294_20
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25560..26699)
DNA (1140bp) protein (380aa)
glycerate kinase (EC:2.7.1.31)
Putative glycerate kinase n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2CX16_CLOSY
Putative glycerate kinase {ECO:0000313|EMBL:ERI73762.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_058_072G1_scaffold_294_21
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26721..27569)
DNA (849bp) protein (283aa)
Transcriptional regulator, RpiR family n=4 Tax=Clostridium RepID=E9SI87_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03988.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
RpiR family transcriptional regulator
L3_058_072G1_scaffold_294_22
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27827..28786)
DNA (960bp) protein (320aa)
hprA; glycerate dehydrogenase HprA (EC:1.1.1.29)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FI69_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03987.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_058_072G1_scaffold_294_23
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28966..30264)
DNA (1299bp) protein (433aa)
TRAP dicarboxylate transporter n=2 Tax=Clostridium symbiosum RepID=E7GSN3_CLOSY
TRAP dicarboxylate transporter {ECO:0000313|EMBL:EGA92252.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
TRAP dicarboxylate transporter subunit DctM
L3_058_072G1_scaffold_294_24
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30261..30791)
DNA (531bp) protein (177aa)
ABC transporter n=3 Tax=Clostridium RepID=E7GSN2_CLOSY
ABC transporter {ECO:0000313|EMBL:EGA92251.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
ABC transporter permease
L3_058_072G1_scaffold_294_25
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30824..31882)
DNA (1059bp) protein (353aa)
ABC transporter n=3 Tax=Clostridium RepID=E7GSN1_CLOSY
ABC transporter {ECO:0000313|EMBL:EGA92250.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
TRAP family 2,3-diketo-L-gulonate transporter periplasmic 2,3-diketo-L-gulonate-binding protein
L3_058_072G1_scaffold_294_26
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31898..33436)
DNA (1539bp) protein (513aa)
Xylulokinase (EC:2.7.1.17)
Carbohydrate kinase, FGGY family protein n=2 Tax=Clostridium RepID=U2BNG5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03983.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_058_072G1_scaffold_294_27
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33472..34314)
DNA (843bp) protein (281aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase n=3 Tax=Clostridium RepID=E9SI81_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92248.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_058_072G1_scaffold_294_28
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34373..35410)
DNA (1038bp) protein (346aa)
Sorbitol dehydrogenase n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GSM8_CLOSY
Sorbitol dehydrogenase {ECO:0000313|EMBL:EGA92247.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
alcohol dehydrogenase
L3_058_072G1_scaffold_294_29
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35740..36513)
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GSM7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92246.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_058_072G1_scaffold_294_30
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36587..37744)
DNA (1158bp) protein (386aa)
Putative alcohol dehydrogenase n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2CX04_CLOSY
Putative alcohol dehydrogenase {ECO:0000313|EMBL:ERI73747.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
Displaying items 1-30 of 44 in total

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