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L3_058_072G1_scaffold_307

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Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_072G1_scaffold_307_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

311..1387
DNA (1077bp) protein (359aa)
Acyltransferase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SLQ0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92479.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
acyltransferase 3
L3_058_072G1_scaffold_307_2
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1347..2087)
DNA (741bp) protein (247aa)
RNA polymerase sigma factor n=4 Tax=Clostridium RepID=U2BUW6_CLOSY
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
RNA polymerase, sigma 29 subunit, SigE
L3_058_072G1_scaffold_307_3
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2222..3010)
DNA (789bp) protein (263aa)
Sigma-E processing peptidase SpoIIGA n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2D957_CLOSY
Sigma-E processing peptidase SpoIIGA {ECO:0000313|EMBL:ERI76046.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
peptidase U4 sporulation factor SpoIIGA
L3_058_072G1_scaffold_307_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3507..4730)
DNA (1224bp) protein (408aa)
Cell division protein FtsZ n=4 Tax=Clostridium RepID=E7GS95_CLOSY
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
cell division protein FtsZ
L3_058_072G1_scaffold_307_5
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5134..5862)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SLQ4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06691.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Cell division septal protein
L3_058_072G1_scaffold_307_6
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5917..7173)
DNA (1257bp) protein (419aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=4 Tax=Clostridium RepID=E7GS93_CLOSY
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
L3_058_072G1_scaffold_307_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7293..8453)
DNA (1161bp) protein (387aa)
Cell division membrane protein n=4 Tax=Clostridium RepID=E7GS92_CLOSY
Cell division membrane protein {ECO:0000313|EMBL:EGA92473.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Bacterial cell division membrane protein
L3_058_072G1_scaffold_307_8
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8556..9902)
DNA (1347bp) protein (449aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=4 Tax=Clostridium RepID=E7GS91_CLOSY
L3_058_072G1_scaffold_307_9
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9915..10871)
DNA (957bp) protein (319aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=4 Tax=Clostridium RepID=E7GS90_CLOSY
L3_058_072G1_scaffold_307_10
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10970..11245)
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F9Y4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06696.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_058_072G1_scaffold_307_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11250..12989)
DNA (1740bp) protein (580aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Penicillin-binding protein, transpeptidase domain protein n=4 Tax=Clostridium RepID=E9SLQ9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92470.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_058_072G1_scaffold_307_12
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13228..15399)
DNA (2172bp) protein (724aa)
Penicillin-binding protein, transpeptidase domain protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BYB5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06698.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Cell division protein FtsI/penicillin-binding protein 2
L3_058_072G1_scaffold_307_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15377..15859)
DNA (483bp) protein (161aa)
Septum formation initiator n=4 Tax=Clostridium RepID=E7GS87_CLOSY
Septum formation initiator {ECO:0000313|EMBL:EGA92468.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Septum formation initiator.
L3_058_072G1_scaffold_307_14
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15866..16810)
DNA (945bp) protein (315aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=2 Tax=Clostridium RepID=E7GS86_CLOSY
L3_058_072G1_scaffold_307_15
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16807..17232)
DNA (426bp) protein (142aa)
Protein MraZ n=4 Tax=Clostridium RepID=E7GS85_CLOSY
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
mraZ protein
L3_058_072G1_scaffold_307_16
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17442..17597)
DNA (156bp) protein (52aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9SLR4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92465.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Spo0E like sporulation regulatory protein.
L3_058_072G1_scaffold_307_17
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17876..19273)
DNA (1398bp) protein (466aa)
Transporter n=3 Tax=Clostridium RepID=E7GS83_CLOSY
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Na+-dependent transporters of the SNF family
L3_058_072G1_scaffold_307_18
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19689..20786
DNA (1098bp) protein (366aa)
Ribosome-binding ATPase YchF n=3 Tax=Clostridium symbiosum RepID=U2CVP7_CLOSY
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
GTP-binding protein YchF
L3_058_072G1_scaffold_307_19
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20910..21347
DNA (438bp) protein (146aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9SLR7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06705.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_058_072G1_scaffold_307_20
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21623..22750
DNA (1128bp) protein (376aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201};; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F9Z4_9CLOT
L3_058_072G1_scaffold_307_21
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22926..24224)
DNA (1299bp) protein (433aa)
FMN-binding domain protein n=2 Tax=Clostridium symbiosum RepID=U2BNB9_CLOSY
FMN-binding domain protein {ECO:0000313|EMBL:ERI73313.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L3_058_072G1_scaffold_307_22
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24295..24753)
DNA (459bp) protein (153aa)
Uncharacterized protein n=2 Tax=Clostridium symbiosum RepID=E9SLS0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92459.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_058_072G1_scaffold_307_23
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24750..25151)
DNA (402bp) protein (134aa)
Transcriptional regulator n=4 Tax=Clostridium RepID=E7GS77_CLOSY
Transcriptional regulator {ECO:0000313|EMBL:EGA92458.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
transcriptional regulator, BadM/Rrf2 family
L3_058_072G1_scaffold_307_24
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25210..26145)
DNA (936bp) protein (312aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
cysteine synthase (EC:2.5.1.47)
Cysteine synthase n=2 Tax=Clostridium RepID=E7GS76_CLOSY
L3_058_072G1_scaffold_307_25
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26304..26426)
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2B590_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI73309.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_058_072G1_scaffold_307_26
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26443..27234)
DNA (792bp) protein (264aa)
Ferredoxin n=3 Tax=Clostridium RepID=U2BNB5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06775.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
electron transport complex, RnfABCDGE type, B subunit
L3_058_072G1_scaffold_307_27
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27250..27825)
DNA (576bp) protein (192aa)
Electron transport complex, RnfABCDGE type, A subunit n=4 Tax=Clostridium RepID=E9SLS4_CLOSY
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
electron transport complex, RnfABCDGE type, A subunit
L3_058_072G1_scaffold_307_28
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27839..28669)
DNA (831bp) protein (277aa)
Electron transport complex, RnfABCDGE type, E subunit n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2D1A4_CLOSY
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
electron transport complex, RnfABCDGE type, E subunit
L3_058_072G1_scaffold_307_29
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28685..29293)
DNA (609bp) protein (203aa)
Electron transport complex, RnfABCDGE type, G subunit n=3 Tax=Clostridium RepID=E9SLS6_CLOSY
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Predicted NADH:ubiquinone oxidoreductase, subunit RnfG
L3_058_072G1_scaffold_307_30
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29293..30228)
DNA (936bp) protein (312aa)
Electron transport complex, RnfABCDGE type, D subunit n=3 Tax=Clostridium symbiosum RepID=E9SLS7_CLOSY
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
electron transport complex, RnfABCDGE type, D subunit
Displaying items 1-30 of 55 in total

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