ggKbase home page

L3_058_072G1_scaffold_358

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_072G1_scaffold_358_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

205..708
DNA (504bp) protein (168aa)
Putative iron hydrogenase, gamma subunit n=2 Tax=Clostridium butyricum RepID=M8KEN5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35310.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NADH dehydrogenase (ubiquinone) 24 kDa subunit
L3_058_072G1_scaffold_358_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

698..2668
DNA (1971bp) protein (657aa)
NADH-quinone oxidoreductase subunit F n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ARC1_CLOBU
NADH-quinone oxidoreductase subunit F {ECO:0000313|EMBL:ENZ35309.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative iron hydrogenase, electron-transfer subunit
L3_058_072G1_scaffold_358_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2686..4467
DNA (1782bp) protein (594aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AG11_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35308.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
iron hydrogenase 1
L3_058_072G1_scaffold_358_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4914..5414
DNA (501bp) protein (167aa)
Transcriptional regulator, CarD family n=4 Tax=Clostridium butyricum RepID=B1QVK2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88333.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
transcription factor CarD
L3_058_072G1_scaffold_358_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5578..6441)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z623_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35306.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
phosphoesterase
L3_058_072G1_scaffold_358_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6643..7578)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z6K0_CLOBU
Putative membrane protein {ECO:0000313|EMBL:KJZ88258.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
EamA-like transporter family/multidrug resistance efflux transporter
L3_058_072G1_scaffold_358_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7728..8279
DNA (552bp) protein (184aa)
DNA-binding protein n=3 Tax=Clostridium butyricum RepID=B1QVJ9_CLOBU
Transcriptional regulator yidN, Cro/CI family {ECO:0000313|EMBL:KJZ88312.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
transcriptional regulator, XRE family with cupin sensor
L3_058_072G1_scaffold_358_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8366..8863
DNA (498bp) protein (166aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=R0AG07_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88319.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L3_058_072G1_scaffold_358_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8972..9715
DNA (744bp) protein (248aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0ATD7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35302.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L3_058_072G1_scaffold_358_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9745..10599
DNA (855bp) protein (285aa)
YqeB family selenium-dependent molybdenum hydroxylase system protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z618_CLOBU
YqeB family selenium-dependent molybdenum hydroxylase system protein {ECO:0000313|EMBL:ENZ35301.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
selenium-dependent molybdenum hydroxylase system protein, YqeB family
L3_058_072G1_scaffold_358_11
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10618..11670
DNA (1053bp) protein (351aa)
Putative xanthine dehydrogenase accessory factor subfamily, putative n=2 Tax=Clostridium butyricum RepID=B1QVJ5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97458.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
XshC-Cox1-family protein
L3_058_072G1_scaffold_358_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11928..12524
DNA (597bp) protein (199aa)
Selenium metabolism protein YedF n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ARB6_CLOBU
Selenium metabolism protein YedF {ECO:0000313|EMBL:ENZ35299.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
yedF2; selenium metabolism protein YedF
L3_058_072G1_scaffold_358_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12908..15889
DNA (2982bp) protein (994aa)
levR1; transcriptional regulatory protein LevR (EC:2.7.1.-)
Transcriptional regulator (AAA-type ATPase and DNA-binding domain containing protein) n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U7X7_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:KHD17102.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
L3_058_072G1_scaffold_358_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16030..16506
DNA (477bp) protein (159aa)
Putative PTS IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MQJ8_CLOSA
PTS galactitol transporter subunit IIA {ECO:0000313|EMBL:KHD17103.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
ptsN; putative PTS IIA-like nitrogen-regulatory protein PtsN
L3_058_072G1_scaffold_358_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16643..16927
DNA (285bp) protein (95aa)
Phosphotransferase system, lactose/cellobiose-specific IIB subunit n=2 Tax=Clostridium RepID=A6LWC5_CLOB8
PTS galactitol transporter subunit IIB {ECO:0000313|EMBL:KHD17104.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
phosphotransferase system, lactose/cellobiose-specific IIB subunit
L3_058_072G1_scaffold_358_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16964..18229
DNA (1266bp) protein (422aa)
PTS system Galactitol-specific IIC component n=1 Tax=Clostridium sp. DL-VIII RepID=G7M422_9CLOT
PTS system galactitol-specific transporter subunit IIC {ECO:0000313|EMBL:KHD17105.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
gatC2; galactitol permease IIC component GatC
L3_058_072G1_scaffold_358_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18350..19726
DNA (1377bp) protein (459aa)
Glycerol-1-phosphate dehydrogenase (NAD(P)(+)) n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LWC7_CLOB8
Glycerol-1-phosphate dehydrogenase {ECO:0000313|EMBL:KHD17106.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
glycerol-1-phosphate dehydrogenase (NAD(P)(+))
L3_058_072G1_scaffold_358_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19757..20557
DNA (801bp) protein (267aa)
HAD-superfamily hydrolase, subfamily IIA n=1 Tax=Clostridium sp. DL-VIII RepID=G7M420_9CLOT
HAD family hydrolase {ECO:0000313|EMBL:KHD17107.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
HAD family hydrolase
L3_058_072G1_scaffold_358_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20630..21673
DNA (1044bp) protein (348aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU000439}; EC=1.1.1.94 {ECO:0000256|RuleBase:RU000439};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
Glycerol-3-phosphate dehydrogenase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G0U8_CLOPA
NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein
L3_058_072G1_scaffold_358_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21821..22858)
DNA (1038bp) protein (346aa)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:0000256|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00625}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
selD; selenide, water dikinase (EC:2.7.9.3)
UPI0003D6038A related cluster n=1 Tax=unknown RepID=UPI0003D6038A
L3_058_072G1_scaffold_358_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23302..24624
DNA (1323bp) protein (441aa)
Xanthine permease n=4 Tax=Clostridium butyricum RepID=B1QVJ2_CLOBU
Uracil-xanthine permease {ECO:0000313|EMBL:KJZ88296.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
uracil-xanthine permease
L3_058_072G1_scaffold_358_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24717..25499
DNA (783bp) protein (261aa)
Molybdopterin dehydrogenase, FAD-binding n=3 Tax=Clostridium butyricum RepID=C4IFT4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35296.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein
L3_058_072G1_scaffold_358_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25605..26063
DNA (459bp) protein (153aa)
hcrC; 4-hydroxybenzoyl-CoA reductase subunit gamma (EC:1.3.7.9)
Carbon-monoxide dehydrogenase small subunit n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z6J1_CLOBU
Carbon-monoxide dehydrogenase small subunit {ECO:0000313|EMBL:ENZ35295.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L3_058_072G1_scaffold_358_24
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26066..28348
DNA (2283bp) protein (761aa)
xdhD; hypoxanthine oxidase XdhD (EC:1.-.-.-)
Putative xanthine dehydrogenase, molybdopterin-binding subunit n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K6G5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97457.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
L3_058_072G1_scaffold_358_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28338..29021
DNA (684bp) protein (228aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JJT3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35293.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
molybdopterin-guanine dinucleotide biosynthesis protein A
L3_058_072G1_scaffold_358_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29329..29760
DNA (432bp) protein (144aa)
UPI0003D5F225 related cluster n=1 Tax=unknown RepID=UPI0003D5F225
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ETI90499.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
GntR-family transcriptional regulator
L3_058_072G1_scaffold_358_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29717..30625
DNA (909bp) protein (303aa)
UPI0003D6873C related cluster n=1 Tax=unknown RepID=UPI0003D6873C
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ETI90500.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
ABC transporter ATP-binding protein
L3_058_072G1_scaffold_358_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30711..31358
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z6I9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35290.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L3_058_072G1_scaffold_358_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31470..32564)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ARA9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35289.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L3_058_072G1_scaffold_358_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32869..34176
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AFZ7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35288.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
Displaying items 1-30 of 65 in total

View Taxonomy