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L3_058_072G1_scaffold_406

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_072G1_scaffold_406_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

693..1121
DNA (429bp) protein (143aa)
CheW-like protein n=2 Tax=Clostridium symbiosum RepID=E9SUV7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93320.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
cheW36H-1; scaffold protein CheW associated with MCPs of class 36H
L3_058_072G1_scaffold_406_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1314..3119
DNA (1806bp) protein (602aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=U2DCK9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI77241.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L3_058_072G1_scaffold_406_3
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3237..3596
DNA (360bp) protein (120aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=U2D713_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06123.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_058_072G1_scaffold_406_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3981..4223
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BGL5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI77244.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_058_072G1_scaffold_406_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4177..5493
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BGL5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI77244.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L3_058_072G1_scaffold_406_6
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5531..6574
DNA (1044bp) protein (348aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
S-adenosylmethionine--tRNA ribosyltransferase-isomerase (EC:5.-.-.-)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=3 Tax=Clostridium RepID=E9SUV3_CLOSY
L3_058_072G1_scaffold_406_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6647..7666
DNA (1020bp) protein (340aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPE4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93325.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_058_072G1_scaffold_406_8
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7656..8471
DNA (816bp) protein (272aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=E9SUV1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06119.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_058_072G1_scaffold_406_9
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8464..9189
DNA (726bp) protein (242aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
ribosomal large subunit pseudouridine synthase F (EC:5.4.99.12 5.4.99.-)
Pseudouridine synthase n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BZM5_CLOSY
L3_058_072G1_scaffold_406_10
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9222..11213
DNA (1992bp) protein (664aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
DNA ligase, NAD-dependent (EC:6.5.1.2)
DNA ligase n=2 Tax=Clostridium symbiosum RepID=E7GPE7_CLOSY
L3_058_072G1_scaffold_406_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11220..11867
DNA (648bp) protein (216aa)
phosphoglycolate phosphatase (EC:3.1.3.18)
HAD hydrolase, family IA, variant 1 n=3 Tax=Clostridium RepID=E9SUU8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93329.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_058_072G1_scaffold_406_12
unknown

Not on your lists

11839..11988
DNA (150bp) protein (50aa)

This feature has no annotations

L3_058_072G1_scaffold_406_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11985..13127)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=3 Tax=Clostridium symbiosum RepID=U2DCL6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI77251.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Rubrerythrin.
L3_058_072G1_scaffold_406_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13242..14159
DNA (918bp) protein (306aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
homoserine O-succinyltransferase (EC:2.3.1.46)
Homoserine O-succinyltransferase n=3 Tax=Clostridium symbiosum PF0_CLOSY">RepID=E7GPF0_CLOSY
L3_058_072G1_scaffold_406_15
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14810..15112
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BGM2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI77254.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_058_072G1_scaffold_406_16
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15417..16382
DNA (966bp) protein (322aa)
Phosphoglycerate dehydrogenase (EC:1.1.1.95)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 PF4_CLOSY">RepID=E7GPF4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93335.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_058_072G1_scaffold_406_17
unknown

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comp(16536..17969)
DNA (1434bp) protein (478aa)

This feature has no annotations

L3_058_072G1_scaffold_406_18
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18417..19772)
DNA (1356bp) protein (452aa)
Amino acid permease n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BGM7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93339.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
amino acid permease
L3_058_072G1_scaffold_406_19
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19989..21212)
DNA (1224bp) protein (408aa)
Amidohydrolase n=2 Tax=Clostridium symbiosum RepID=E9SRI6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93340.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
amidohydrolase
L3_058_072G1_scaffold_406_20
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21416..23356)
DNA (1941bp) protein (647aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SRI5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93341.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
DNA-binding transcriptional activator of the SARP family
L3_058_072G1_scaffold_406_21
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23845..25005
DNA (1161bp) protein (387aa)
4Fe-4S binding domain protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2D730_CLOSY
4Fe-4S binding domain protein {ECO:0000313|EMBL:ERI77262.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L3_058_072G1_scaffold_406_22
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25360..26736
DNA (1377bp) protein (459aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00035EF8F0
Uncharacterized protein {ECO:0000313|EMBL:ERI73878.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L3_058_072G1_scaffold_406_23
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26833..28161)
DNA (1329bp) protein (443aa)
MATE efflux family protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SRI3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93343.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
MATE efflux family protein
L3_058_072G1_scaffold_406_24
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28161..28592)
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FBB8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06322.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
regulatory protein MarR
L3_058_072G1_scaffold_406_25
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

28937..30328
DNA (1392bp) protein (464aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00037CDE50
Uncharacterized protein {ECO:0000313|EMBL:EFS25200.1}; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans ATCC 49185.;"
Predicted membrane protein
L3_058_072G1_scaffold_406_26
Brevibacillus borstelensis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

30367..31701
DNA (1335bp) protein (445aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003811E20
Aminobenzoyl-glutamate utilization protein B {ECO:0000313|EMBL:EMT54630.1}; TaxID=1300222 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus borstelensis AK1.;"
aminobenzoyl-glutamate utilization protein B
L3_058_072G1_scaffold_406_27
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31807..33117
DNA (1311bp) protein (437aa)
Branched-chain amino acid transport system II carrier protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SRI1_CLOSY
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:EGA93345.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
branched-chain amino acid uptake carrier
L3_058_072G1_scaffold_406_28
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33631..35046
DNA (1416bp) protein (472aa)
Magnesium transporter n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SRI0_CLOSY
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Mg2+ transporter (mgtE)
L3_058_072G1_scaffold_406_29
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35163..35843)
DNA (681bp) protein (227aa)
Asp/Glu/Hydantoin racemase n=2 Tax=Clostridium symbiosum RepID=U2D8I1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93353.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
maleate cis-trans isomerase
L3_058_072G1_scaffold_406_30
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35908..36678)
DNA (771bp) protein (257aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPH3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93354.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
DeoR family transcriptional regulator
Displaying items 1-30 of 33 in total

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