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L3_058_072G1_scaffold_439

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_072G1_scaffold_439_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(136..1434)
DNA (1299bp) protein (433aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=741093 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli Xuzhou21.;"
Enolase n=1415 Tax=Enterobacteriaceae RepID=ENO_ECO24
eno; enolase
L3_058_072G1_scaffold_439_2
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1522..3138)
DNA (1617bp) protein (539aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=766142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae 155-74.;"
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase n=41 Tax=Enterobacteriaceae RepID=F3V8W3_SHIDY
L3_058_072G1_scaffold_439_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3222..3587)
DNA (366bp) protein (122aa)
Nucleoside triphosphate pyrophosphohydrolase n=1 Tax=Escherichia coli 2731150 RepID=M9DMJ4_ECOLX
MazG family protein
Protein MazG {ECO:0000313|EMBL:EGI19723.1}; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M718.;"
L3_058_072G1_scaffold_439_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3601..4011)
DNA (411bp) protein (137aa)
mazG; nucleoside triphosphate pyrophosphohydrolase (EC:3.6.1.19)
Nucleoside triphosphate pyrophosphohydrolase n=4 Tax=Escherichia coli RepID=L3XXD3_ECOLX
MazG protein; Uncharacterized protein {ECO:0000313|EMBL:CDN83385.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
L3_058_072G1_scaffold_439_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4107..6341)
DNA (2235bp) protein (745aa)
GTP pyrophosphokinase n=1188 Tax=Bacteria RepID=RELA_ECO57
relA; (p) ppGpp synthetase I/GTP pyrophosphokinase
GTP pyrophosphokinase {ECO:0000313|EMBL:EOW01508.1}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
L3_058_072G1_scaffold_439_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6389..7690)
DNA (1302bp) protein (434aa)
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01010}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=240 Tax=Escherichia coli RepID=RLMD_ECOL5
ygcA; 23S rRNA Uracil-5-methyltransferase
L3_058_072G1_scaffold_439_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7747..10503
DNA (2757bp) protein (919aa)
sensory histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
Two-component sensor kinase n=51 Tax=Escherichia RepID=D2NLU3_ECOS5
L3_058_072G1_scaffold_439_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10734..12074)
DNA (1341bp) protein (447aa)
Glucarate dehydratase n=36 Tax=Escherichia coli RepID=D2NLU4_ECOS5
glucarate dehydratase
Glucarate dehydratase {ECO:0000313|EMBL:CDN83389.1}; GudD protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
L3_058_072G1_scaffold_439_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12095..13435)
DNA (1341bp) protein (447aa)
Putative glucarate dehydratase {ECO:0000313|EMBL:CDL48212.1}; EC=4.2.1.40 {ECO:0000313|EMBL:CDL48212.1};; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
Glucarate dehydratase n=37 Tax=Escherichia coli RepID=G0DAI9_ECOLX
putative glucarate dehydratase
L3_058_072G1_scaffold_439_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13437..14789)
DNA (1353bp) protein (451aa)
Glucarate transporter n=839 Tax=Enterobacteriaceae RepID=E2QQN5_ECOLX
D-glucarate transporter GudP
Putative glucarate transporter {ECO:0000313|EMBL:EKJ13518.1}; TaxID=1005550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli EC1865.;"
L3_058_072G1_scaffold_439_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15223..15672)
DNA (450bp) protein (150aa)
Uncharacterized protein n=42 Tax=Escherichia RepID=D2NLU7_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI56121.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
L3_058_072G1_scaffold_439_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15690..16472)
DNA (783bp) protein (261aa)
Pseudouridine synthase n=194 Tax=Escherichia RepID=D2NLU8_ECOS5
yqcB; tRNA pseudouridine synthase C
RNA pseudouridylate synthase family protein {ECO:0000313|EMBL:KEJ56233.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
L3_058_072G1_scaffold_439_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16472..16801)
DNA (330bp) protein (110aa)
Uncharacterized protein n=57 Tax=Escherichia RepID=D2NLU9_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEJ56234.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
L3_058_072G1_scaffold_439_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17423..17968)
DNA (546bp) protein (182aa)
Protein Syd n=34 Tax=Escherichia coli RepID=G0DAJ6_ECOLX
syd; Syd protein
SecY interacting protein Syd {ECO:0000313|EMBL:AJO84771.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_058_072G1_scaffold_439_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18036..18884
DNA (849bp) protein (283aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|SAAS:SAAS00037296}; EC=1.7.1.13 {ECO:0000256|SAAS:SAAS00001352};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
NADPH-dependent 7-cyano-7-deazaguanine reductase n=27 Tax=Escherichia coli RepID=G0DAJ7_ECOLX
hypothetical protein
L3_058_072G1_scaffold_439_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18996..20360
DNA (1365bp) protein (455aa)
LOG family protein YgdH n=1259 Tax=Enterobacteriaceae RepID=YGDH_ECO57
ygdH; rossmann fold nucleotide-binding protein
Putative nucleotide binding protein {ECO:0000313|EMBL:EGI44926.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
L3_058_072G1_scaffold_439_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20917..22206
DNA (1290bp) protein (430aa)
Serine transporter n=398 Tax=Escherichia RepID=E2QQP2_ECOLX
sdaC; serine transporter
Serine transporter {ECO:0000313|EMBL:EFR18370.1}; TaxID=670897 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2362-75.;"
L3_058_072G1_scaffold_439_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22264..23631
DNA (1368bp) protein (456aa)
L-serine ammonia-lyase {ECO:0000313|EMBL:EII24605.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EII24605.1};; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
L-serine dehydratase 2 n=573 Tax=Enterobacteriaceae RepID=E2QQP3_ECOLX
sdaB; L-serine deaminase II
L3_058_072G1_scaffold_439_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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23653..24498
DNA (846bp) protein (282aa)
Flap endonuclease Xni {ECO:0000256|HAMAP-Rule:MF_01192, ECO:0000256|SAAS:SAAS00008260}; Short=FEN {ECO:0000256|HAMAP-Rule:MF_01192};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01192, ECO:0000256|SAAS:SAAS00273675};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Flap endonuclease Xni n=243 Tax=Escherichia RepID=D5CZ75_ECOKI
xni; exonuclease IX
L3_058_072G1_scaffold_439_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24603..25751)
DNA (1149bp) protein (383aa)
Lactaldehyde reductase n=30 Tax=Escherichia coli RepID=G0DAK3_ECOLX
L-1,2-propanediol oxidoreductase
1,2-propanediol oxidoreductase {ECO:0000313|EMBL:AJO84777.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_058_072G1_scaffold_439_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25779..26426)
DNA (648bp) protein (216aa)
L-fuculose phosphate aldolase (EC:4.1.2.17)
L-fuculose phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00987}; EC=4.1.2.17 {ECO:0000256|HAMAP-Rule:MF_00987};; L-fuculose-1-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00987}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L-fuculose phosphate aldolase n=391 Tax=Escherichia RepID=FUCA_ECOL6
L3_058_072G1_scaffold_439_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26973..28289
DNA (1317bp) protein (439aa)
L-fucose-proton symporter n=283 Tax=Escherichia RepID=E2QQP7_ECOLX
fucP; L-fucose transporter
H+ symporter permease {ECO:0000313|EMBL:EZJ36849.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
L3_058_072G1_scaffold_439_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28322..30097
DNA (1776bp) protein (592aa)
fucI; L-fucose isomerase (EC:5.3.1.25)
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040955};; 6-deoxy-L-galactose isomerase {ECO:0000256|HAMAP-Rule:MF_01254}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
L-fucose isomerase n=178 Tax=Escherichia RepID=FUCI_ECO45
L3_058_072G1_scaffold_439_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30206..31624
DNA (1419bp) protein (473aa)
fucK; L-fuculokinase (EC:2.7.1.51)
L-fuculokinase {ECO:0000256|HAMAP-Rule:MF_00986, ECO:0000313|EMBL:CDN83408.1}; EC=2.7.1.51 {ECO:0000256|HAMAP-Rule:MF_00986};; L-fuculose kinase {ECO:0000256|HAMAP-Rule:MF_00986}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
L-fuculokinase n=31 Tax=Escherichia coli RepID=G0DAK8_ECOLX
L3_058_072G1_scaffold_439_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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31626..32048
DNA (423bp) protein (141aa)
L-fucose mutarotase {ECO:0000256|HAMAP-Rule:MF_01662, ECO:0000256|SAAS:SAAS00010479}; EC=5.1.3.29 {ECO:0000256|HAMAP-Rule:MF_01662, ECO:0000256|SAAS:SAAS00148242};; Fucose 1-epimerase {ECO:0000256|HAMAP-Rule:MF_01662}; Type-2 mutarotase {ECO:0000256|HAMAP-Rule:MF_01662}; TaxID=869687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4.0967.;"
L-fucose mutarotase n=1387 Tax=Enterobacteriaceae RepID=FUCM_ECO24
fucU; fucose operon protein FucU
L3_058_072G1_scaffold_439_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32106..32837
DNA (732bp) protein (244aa)
L-fucose operon activator n=767 Tax=Enterobacteriaceae RepID=FUCR_ECOLI
L-fucose operon activator
Sugar-specific transcriptional regulator, TrmB family {ECO:0000313|EMBL:EII24774.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
L3_058_072G1_scaffold_439_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32881..33981)
DNA (1101bp) protein (367aa)
Ribosomal RNA large subunit methyltransferase M {ECO:0000256|HAMAP-Rule:MF_01551, ECO:0000256|SAAS:SAAS00058276}; EC=2.1.1.186 {ECO:0000256|HAMAP-Rule:MF_01551, ECO:0000256|SAAS:SAAS00058274};; 23S rRNA (cytidine2498-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01551}; 23S rRNA 2'-O-ribose methyltransferase RlmM {ECO:0000256|HAMAP-Rule:MF_01551}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
Ribosomal RNA large subunit methyltransferase M n=818 Tax=Enterobacteriaceae RepID=RLMM_ECO24
ygdE; putative RNA 2'-O-ribose methyltransferase
L3_058_072G1_scaffold_439_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33974..34369)
DNA (396bp) protein (132aa)
UPF0382 inner membrane protein YgdD n=1299 Tax=Enterobacteriaceae RepID=YGDD_ECO57
ygdD; hypothetical protein
Conserved predicted inner membrane protein {ECO:0000313|EMBL:CAS10622.1}; TaxID=574521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O127:H6 (strain E2348/69 / EPEC).;"
L3_058_072G1_scaffold_439_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34388..35305)
DNA (918bp) protein (306aa)
Glycine cleavage system transcriptional activator protein n=27 Tax=Escherichia coli RepID=G0DAL3_ECOLX
gcvA; Glycine cleavage system transcriptional activator protein
Glycine cleavage system transcriptional activator {ECO:0000313|EMBL:KEJ56253.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
L3_058_072G1_scaffold_439_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35656..35883)
DNA (228bp) protein (76aa)
Uncharacterized protein n=116 Tax=Enterobacteriaceae RepID=D2NLW6_ECOS5
ygdI; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMX83064.1}; TaxID=1116119 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2719100.;"
Displaying items 1-30 of 34 in total

View Taxonomy