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L3_058_072G1_scaffold_478

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_072G1_scaffold_478_1
Cronobacter sakazakii, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..142)
DNA (141bp) protein (47aa)
Uncharacterized protein n=3 Tax=Escherichia coli RepID=E1PIK6_ECOAB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABU77499.1}; TaxID=290339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter sakazakii (strain ATCC BAA-894) (Enterobacter sakazakii).;"
L3_058_072G1_scaffold_478_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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167..1408
DNA (1242bp) protein (414aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1069 Tax=Enterobacteriaceae RepID=FABF_ECO57
3-oxoacyl-(acyl-carrier-protein) synthase 2
L3_058_072G1_scaffold_478_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1528..2337
DNA (810bp) protein (270aa)
pabC; 4-amino-4-deoxychorismate lyase (EC:4.1.3.38)
Aminodeoxychorismate lyase {ECO:0000313|EMBL:EHU29444.1}; EC=4.1.3.38 {ECO:0000313|EMBL:EHU29444.1};; TaxID=868137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1E.;"
4-amino-4-deoxychorismate lyase n=262 Tax=Escherichia RepID=A1A9Z0_ECOK1
L3_058_072G1_scaffold_478_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2340..3362
DNA (1023bp) protein (341aa)
Uncharacterized protein n=826 Tax=Enterobacteriaceae RepID=A7ZKK0_ECO24
yceG; putative thymidylate kinase
Aminodeoxychorismate lyase {ECO:0000313|EMBL:KDV27127.1}; TaxID=1446583 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O145:H25 str. 07-3858.;"
L3_058_072G1_scaffold_478_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3352..3993
DNA (642bp) protein (214aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
Thymidylate kinase n=268 Tax=Escherichia RepID=KTHY_ECO27
thymidylate kinase
L3_058_072G1_scaffold_478_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3990..4994
DNA (1005bp) protein (335aa)
holB; DNA polymerase III subunit delta' (EC:2.7.7.7)
DNA polymerase III subunit delta {ECO:0000313|EMBL:AJO83035.1}; EC=2.7.7.7 {ECO:0000313|EMBL:AJO83035.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
DNA polymerase III delta' subunit n=37 Tax=Escherichia coli RepID=D2NHB4_ECOS5
L3_058_072G1_scaffold_478_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5005..5802
DNA (798bp) protein (266aa)
Uncharacterized deoxyribonuclease YcfH n=1231 Tax=Enterobacteriaceae RepID=YCFH_ECO57
TatD family hydrolase
Uncharacterized protein {ECO:0000313|EMBL:EMX41697.1}; TaxID=1116133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.8.;"
L3_058_072G1_scaffold_478_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6097..7530
DNA (1434bp) protein (478aa)
PTS system glucose-specific IIB component (EC:2.7.1.69)
PTS system glucose-specific EIICB component {ECO:0000313|EMBL:KEJ60918.1}; EC=2.7.1.69 {ECO:0000313|EMBL:KEJ60918.1};; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
PTS system glucose-specific IIBC components n=38 Tax=Escherichia coli RepID=D2NHB6_ECOS5
L3_058_072G1_scaffold_478_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7590..9779)
DNA (2190bp) protein (730aa)
Outer membrane receptor for uptake ferric iron n=26 Tax=Escherichia coli RepID=G0D6S0_ECOLX
Ferric-rhodotorulic acid transporter {ECO:0000313|EMBL:AJO83038.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
outer membrane receptor for uptake ferric iron
L3_058_072G1_scaffold_478_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10113..10472
DNA (360bp) protein (120aa)
HIT-like protein HinT n=1041 Tax=Enterobacteriaceae RepID=HINT_ECO57
hinT; hypothetical protein
HIT domain protein {ECO:0000313|EMBL:EHX34277.1}; TaxID=868191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12A.;"
L3_058_072G1_scaffold_478_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10475..10852
DNA (378bp) protein (126aa)
Uncharacterized protein n=83 Tax=Escherichia RepID=B7NKH5_ECO7I
ycfL; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOV06511.1}; TaxID=1169355 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE38.;"
L3_058_072G1_scaffold_478_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10866..11507
DNA (642bp) protein (214aa)
Penicillin-binding protein activator LpoB n=38 Tax=Escherichia coli RepID=D2NHC1_ECOS5
ycfM; hypothetical protein
Penicillin-binding protein activator LpoB {ECO:0000256|HAMAP-Rule:MF_01889}; Short=PBP activator LpoB {ECO:0000256|HAMAP-Rule:MF_01889};; Flags: Precursor;; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
L3_058_072G1_scaffold_478_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11488..12312
DNA (825bp) protein (275aa)
thiK; thiamine kinase (EC:2.7.1.89)
Thiamine kinase {ECO:0000256|HAMAP-Rule:MF_01604}; EC=2.7.1.89 {ECO:0000256|HAMAP-Rule:MF_01604};; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
Thiamine kinase n=153 Tax=Escherichia RepID=THIK_ECOL6
L3_058_072G1_scaffold_478_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12323..13348
DNA (1026bp) protein (342aa)
nagZ; Beta hexosaminidase (EC:3.2.1.52)
Beta-hexosaminidase {ECO:0000256|HAMAP-Rule:MF_00364, ECO:0000256|SAAS:SAAS00015774}; EC=3.2.1.52 {ECO:0000256|HAMAP-Rule:MF_00364, ECO:0000256|SAAS:SAAS00114579};; Beta-N-acetylhexosaminidase {ECO:0000256|HAMAP-Rule:MF_00364}; N-acetyl-beta-glucosaminidase {ECO:0000256|HAMAP-Rule:MF_00364}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;"
Beta-hexosaminidase n=101 Tax=Escherichia RepID=NAGZ_ECO27
L3_058_072G1_scaffold_478_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13371..13913
DNA (543bp) protein (181aa)
UPF0227 protein YcfP n=1256 Tax=Enterobacteriaceae RepID=YCFP_ECO24
ycfP; hypothetical protein
UPF0227 protein YcfP {ECO:0000256|HAMAP-Rule:MF_01047}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
L3_058_072G1_scaffold_478_16
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14312..15616
DNA (1305bp) protein (435aa)
ndh; NADH dehydrogenase (EC:1.6.99.3)
NADH dehydrogenase {ECO:0000313|EMBL:EDX34170.1}; EC=1.6.99.3 {ECO:0000313|EMBL:EDX34170.1};; TaxID=358708 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae 1012.;"
NadH dehydrogenase n=348 Tax=Enterobacteriaceae RepID=E2QKJ3_ECOLX
L3_058_072G1_scaffold_478_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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15843..16382
DNA (540bp) protein (180aa)
Uncharacterized protein YcfJ n=809 Tax=Enterobacteriaceae RepID=YCFJ_ECOL6
ycfJ; hypothetical protein
Glycine-zipper containing OmpA-like membrane domain protein {ECO:0000313|EMBL:EMW23352.1}; TaxID=1116125 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2845650.;"
L3_058_072G1_scaffold_478_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16444..17076)
DNA (633bp) protein (211aa)
Uncharacterized protein n=37 Tax=Escherichia coli RepID=D2NHC7_ECOS5
hypothetical protein
Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:KEJ62817.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
L3_058_072G1_scaffold_478_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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17317..17574
DNA (258bp) protein (86aa)
Multiple stress resistance protein BhsA n=1228 Tax=Enterobacteriaceae RepID=BHSA_ECO57
hypothetical protein
Multiple stress resistance protein BhsA {ECO:0000313|EMBL:ESD13661.1}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
L3_058_072G1_scaffold_478_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17657..18616)
DNA (960bp) protein (320aa)
Uncharacterized protein n=3 Tax=Escherichia coli RepID=B7UPC9_ECO27
hypothetical protein
LysM domain protein {ECO:0000313|EMBL:EFR14123.1}; TaxID=670897 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2362-75.;"
L3_058_072G1_scaffold_478_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18762..22280)
DNA (3519bp) protein (1173aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
Transcription-repair-coupling factor n=10 Tax=Enterobacteriaceae RepID=L2XEV2_ECOLX
transcription-repair coupling factor
L3_058_072G1_scaffold_478_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22335..23408)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=45 Tax=Escherichia coli RepID=D2NHD1_ECOS5
ycfT; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDL43283.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
L3_058_072G1_scaffold_478_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23669..24868
DNA (1200bp) protein (400aa)
Lipoprotein-releasing system transmembrane protein LolC n=1097 Tax=Bacteria RepID=LOLC_ECO57
outer membrane-specific lipoprotein transporter subunit LolC
Lipoprotein-releasing system transmembrane protein lolC {ECO:0000313|EMBL:EOV73869.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
L3_058_072G1_scaffold_478_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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24861..25562
DNA (702bp) protein (234aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041694}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041671};; TaxID=1446551 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O119:H4 str. 03-3458.;"
Lipoprotein-releasing system ATP-binding protein LolD n=659 Tax=Enterobacteriaceae RepID=LOLD_ECOL5
lolD; lipoprotein transporter ATP-binding subunit
L3_058_072G1_scaffold_478_25
Escherichia fergusonii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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25568..26806
DNA (1239bp) protein (413aa)
Outer membrane-specific lipoprotein transporter subunit membrane component of ABC superfamily n=37 Tax=Escherichia RepID=B7LPQ3_ESCF3
lolE; outer membrane-specific lipoprotein transporter subunit LolE
Outer membrane-specific lipoprotein transporter subunit LolE {ECO:0000313|EMBL:EGC94918.1}; TaxID=981367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia fergusonii ECD227.;"
L3_058_072G1_scaffold_478_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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26835..27746
DNA (912bp) protein (304aa)
N-acetyl-D-glucosamine kinase (EC:2.7.1.59)
N-acetylglucosamine kinase {ECO:0000313|EMBL:AJO83053.1}; EC=2.7.1.59 {ECO:0000313|EMBL:AJO83053.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
N-acetyl-D-glucosamine kinase n=50 Tax=Escherichia coli RepID=D2NHD5_ECOS5
L3_058_072G1_scaffold_478_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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27762..28583
DNA (822bp) protein (274aa)
NAD-dependent protein deacylase {ECO:0000256|HAMAP-Rule:MF_01121}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01121};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01121}; TaxID=868142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2E.;"
NAD-dependent protein deacylase n=1 Tax=Escherichia coli HVH 108 (4-6924867) RepID=V4EYT1_ECOLX
cobB; NAD-dependent deacetylase
L3_058_072G1_scaffold_478_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(28721..29509)
DNA (789bp) protein (263aa)
Inner membrane protein ycfZ n=36 Tax=Escherichia coli RepID=L2ZTA9_ECOLX
membrane protein
Putative factor {ECO:0000313|EMBL:CDL43289.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
L3_058_072G1_scaffold_478_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29506..29967)
DNA (462bp) protein (154aa)
Uncharacterized protein n=36 Tax=Escherichia coli RepID=D2NHD8_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDN81580.1}; YmfA protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
L3_058_072G1_scaffold_478_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(30025..31071)
DNA (1047bp) protein (349aa)
Putrescine-binding periplasmic protein n=303 Tax=Escherichia RepID=B1LI21_ECOSM
potD; spermidine/putrescine ABC transporter substrate-binding protein
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; TaxID=1169340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE21.;"
Displaying items 1-30 of 34 in total

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