name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
L3_058_072G1_scaffold_506_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(2..82)
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Small GTP-binding domain protein (Fragment) n=1 Tax=Clostridium difficile DA00256 RepID=T3ZC90_CLODI
elongation factor Tu
Elongation factor Tu {ECO:0000255|HAMAP-Rule:MF_00118}; Short=EF-Tu {ECO:0000255|HAMAP-Rule:MF_00118};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
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L3_058_072G1_scaffold_506_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(156..803)
|
RNA polymerase factor sigma-70 {ECO:0000313|EMBL:CCL32577.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CCL32577.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
RNA polymerase sigma-H factor n=219 Tax=Clostridium difficile RepID=C9XIH3_CLODC
sigH; RNA polymerase factor sigma-70
|
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L3_058_072G1_scaffold_506_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(868..1395)
|
Uncharacterized protein n=157 Tax=Clostridium difficile RepID=C9XIH2_CLODC
hypothetical protein
YacP-like NYN domain protein {ECO:0000313|EMBL:EQG78957.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
|
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L3_058_072G1_scaffold_506_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(1398..2135)
|
RNA 2'-O ribose methyltransferase substrate binding family protein n=175 Tax=Clostridium difficile RepID=T3IQG8_CLODC
tRNA/rRNA methyltransferase
RNA 2'-O ribose methyltransferase substrate binding family protein {ECO:0000313|EMBL:EQE70936.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
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L3_058_072G1_scaffold_506_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(2148..2906)
|
thyX; FAD-dependent thymidylate synthase (EC:2.1.1.148)
Thymidylate synthase ThyX {ECO:0000256|HAMAP-Rule:MF_01408}; Short=TS {ECO:0000256|HAMAP-Rule:MF_01408};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_01408};; EC=2.1.1.148 {ECO:0000256|HAMAP-Rule:MF_01408};; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
Thymidylate synthase ThyX n=2 Tax=Clostridium difficile RepID=T4Q3A7_CLODI
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L3_058_072G1_scaffold_506_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(3012..3407)
|
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
Mini-ribonuclease 3 n=146 Tax=Clostridium difficile RepID=T3IJ58_CLODC
hypothetical protein
|
|
L3_058_072G1_scaffold_506_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(3410..4807)
|
cysS; Cysteinyl-tRNA synthetase (Cysteine--tRNAligase) (CysRS) (EC:6.1.1.16)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Cysteine--tRNA ligase n=142 Tax=Clostridium difficile RepID=SYC_CLOD6
|
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L3_058_072G1_scaffold_506_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(4952..5107)
|
Uncharacterized protein n=218 Tax=Clostridium difficile RepID=T3IM22_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQG78974.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
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L3_058_072G1_scaffold_506_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(5328..6809)
|
gltX; Glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Glutamate--tRNA ligase n=194 Tax=Clostridium difficile RepID=SYE_CLOD6
|
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L3_058_072G1_scaffold_506_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
7316..8290
|
Helix-turn-helix domain protein n=2 Tax=Clostridium difficile RepID=T4Q3A2_CLODI
Helix-turn-helix domain protein {ECO:0000313|EMBL:EQJ63173.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
putative conjugative transposon proteinTn1549-like, CTn4-Orf1
|
|
L3_058_072G1_scaffold_506_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
8312..8533
|
Uncharacterized protein n=4 Tax=Clostridiales RepID=B6FLH9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83104.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
|
|
L3_058_072G1_scaffold_506_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
8627..9109
|
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=T4PXG6_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ63171.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
putative conjugative transposon proteinTn1549-like, CTn4-Orf3
|
|
L3_058_072G1_scaffold_506_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
9106..10896
|
Type IV secretory system Conjugative DNA transfer family protein n=2 Tax=Clostridium difficile RepID=T4Q3E6_CLODI
TraG/TraD family protein {ECO:0000313|EMBL:EEU96892.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Type IV secretory pathway, VirD4 components
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L3_058_072G1_scaffold_506_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
10889..11059
|
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5B0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU96891.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
|
|
L3_058_072G1_scaffold_506_15
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
11245..11460
|
Maff2 family protein n=4 Tax=Clostridiales RepID=T4P0A1_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL26627.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
|
|
L3_058_072G1_scaffold_506_16
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
11479..12348
|
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M5W4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL26626.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
|
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L3_058_072G1_scaffold_506_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
12391..12795
|
PrgI family protein n=2 Tax=Clostridium difficile RepID=T4Q395_CLODI
conjugative transposon protein
Putative conjugative transposon protein Tn1549-like, CTn4-Orf8 {ECO:0000313|EMBL:CAJ67961.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
|
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L3_058_072G1_scaffold_506_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
12743..14929
|
conjugal transfer protein TraE n=1 Tax=Clostridium difficile RepID=UPI0003659FA8
AAA-like domain protein {ECO:0000313|EMBL:EQJ63166.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
putative hydrolase Tn1549-like, CTn4-Orf9
|
|
L3_058_072G1_scaffold_506_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
15525..17468
|
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=T4Q3E1_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ63165.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
|
|
L3_058_072G1_scaffold_506_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
17501..17773
|
Uncharacterized protein n=2 Tax=Clostridiales RepID=C7H722_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU96272.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
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L3_058_072G1_scaffold_506_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
17763..18491
|
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=T4Q4F3_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EEU96273.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
putative cell surface proteinTn1549-like,CTn4-Orf13
|
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L3_058_072G1_scaffold_506_22
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
18488..18676
|
Uncharacterized protein n=3 Tax=Firmicutes RepID=A7VXX5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY84343.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
putative conjugative transposon proteinTn1549-like, CTn4-Orf14
|
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L3_058_072G1_scaffold_506_23
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
18693..20783
|
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
topB; DNA topoisomerase III; Tn1549-like, CTn4-Orf15 (EC:5.99.1.2)
DNA topoisomerase n=2 Tax=Clostridium difficile RepID=T4Q3F8_CLODI
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L3_058_072G1_scaffold_506_24
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
21002..24508
|
Uncharacterized protein n=1 Tax=Clostridium difficile P30 RepID=T4ZAA8_CLODI
Domain of unknown function (DUF955)./Antirestriction protein (ArdA).
Uncharacterized protein {ECO:0000313|EMBL:CBL26620.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
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L3_058_072G1_scaffold_506_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
24511..24717
|
Uncharacterized protein n=3 Tax=root RepID=C7H731_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU96281.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
|
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L3_058_072G1_scaffold_506_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
24714..25079
|
Cysteine-rich VLP family protein n=1 Tax=Clostridium difficile P28 RepID=T4P093_CLODI
Cysteine-rich VLP family protein {ECO:0000313|EMBL:EQJ63158.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
conjugative transposon protein
|
|
L3_058_072G1_scaffold_506_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(25224..25613)
|
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=T3NBT9_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EEU96283.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
|
|
L3_058_072G1_scaffold_506_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(25564..25833)
|
Helix-turn-helix domain protein n=5 Tax=Clostridium difficile RepID=T3NHR6_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EEU96284.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
|
|
L3_058_072G1_scaffold_506_29
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(25894..27243)
|
Relaxase/mobilization nuclease domain protein n=2 Tax=Clostridium difficile RepID=T4Q3D6_CLODI
Relaxase/Mobilisation nuclease domain.
Relaxase/Mobilisation nuclease domain {ECO:0000313|EMBL:CBL26616.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
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L3_058_072G1_scaffold_506_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(27204..27533)
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Bacterial mobilization family protein n=6 Tax=Clostridium difficile RepID=T2U1J3_CLODI
putative mobilization proteinTn1549-like,CTn4-Orf23
Bacterial mobilisation protein (MobC) {ECO:0000313|EMBL:CKG93649.1}; Putative mobilization proteinTn1549-like,CTn4-Orf23 {ECO:0000313|EMBL:CEJ97664.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
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