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L3_058_072G1_scaffold_512

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_072G1_scaffold_512_1
Listeria grayi, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

120..770
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Listeria grayi DSM 20601 RepID=D7UYL9_LISGR
Uncharacterized protein {ECO:0000313|EMBL:EFI83436.1}; TaxID=525367 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria grayi DSM 20601.;"
hypothetical protein
L3_058_072G1_scaffold_512_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

802..1035
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7D0E8_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA15605.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_058_072G1_scaffold_512_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1189..1638)
DNA (450bp) protein (150aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1BLH2_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT23004.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_058_072G1_scaffold_512_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2468..3043
DNA (576bp) protein (192aa)
Dna-binding domain, resolvase family n=2 Tax=Clostridium butyricum RepID=C4IN60_CLOBU
Dna-binding domain, resolvase family {ECO:0000313|EMBL:EEP52305.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
chromosome partitioning protein
L3_058_072G1_scaffold_512_5
unknown

Not on your lists

comp(3249..3767)
DNA (519bp) protein (173aa)

This feature has no annotations

L3_058_072G1_scaffold_512_6
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3913..5220)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9ITJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS25229.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
hypothetical protein
L3_058_072G1_scaffold_512_7
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5414..5689
DNA (276bp) protein (92aa)
RNA polymerase sigma factor, sigma-70 family protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BYD3_9CLOT
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:EOR19971.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
L3_058_072G1_scaffold_512_8
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5803..5931
DNA (129bp) protein (43aa)
RNA polymerase sigma factor, sigma-70 family protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BYD3_9CLOT
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:EOR19971.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
RNA polymerase sigma factor, sigma-70 family protein
L3_058_072G1_scaffold_512_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6023..6517
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SPV2_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87809.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_058_072G1_scaffold_512_10
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7761..7946
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0J3U7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS77258.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L3_058_072G1_scaffold_512_11
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8295..9239)
DNA (945bp) protein (315aa)
Redoxin family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QDJ3_9CLOT
Redoxin family protein {ECO:0000313|EMBL:EKY26016.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
Thiol-disulfide isomerase and thioredoxins
L3_058_072G1_scaffold_512_12
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9270..10157)
DNA (888bp) protein (296aa)
4Fe-4S binding domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QE95_9CLOT
4Fe-4S binding domain protein {ECO:0000313|EMBL:EKY26015.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
putative iron-sulfur-binding membrane protein
L3_058_072G1_scaffold_512_13
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10150..10290)
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QDG0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY26014.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_058_072G1_scaffold_512_14
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10392..11087
DNA (696bp) protein (232aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Coprococcus catus GD/7 RepID=D4JBA8_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CBK81629.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L3_058_072G1_scaffold_512_15
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11084..12283
DNA (1200bp) protein (400aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q7U6_9CLOT
Signal transduction histidine kinase
L3_058_072G1_scaffold_512_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13477..13761
DNA (285bp) protein (95aa)
transposase IS232 n=1 Tax=Clostridium botulinum RepID=UPI0003728B25
Transposase {ECO:0000313|EMBL:KIL07598.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
integrase catalytic subunit
L3_058_072G1_scaffold_512_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13887..14108
DNA (222bp) protein (74aa)
Integrase, catalytic region n=1 Tax=Clostridium botulinum BKT015925 RepID=F4A5L4_CLOBO
integrase catalytic subunit
Integrase, catalytic region {ECO:0000313|EMBL:AEB75620.1}; TaxID=929506 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum BKT015925.;"
L3_058_072G1_scaffold_512_18
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14124..14333
DNA (210bp) protein (70aa)
Integrase, catalytic region n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M1B7_CLOB8
integrase catalytic subunit
Integrase, catalytic region {ECO:0000313|EMBL:ABR36397.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L3_058_072G1_scaffold_512_19
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14791..15120
DNA (330bp) protein (110aa)
Bacterial mobilisation protein (MobC) n=7 Tax=Firmicutes RepID=D4JXS8_9FIRM
Bacterial mobilisation protein (MobC).
Uncharacterized protein {ECO:0000313|EMBL:EFB77097.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L3_058_072G1_scaffold_512_20
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15081..16289
DNA (1209bp) protein (403aa)
Relaxase/Mobilisation nuclease domain n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DIX5_CLOSC
Relaxase/Mobilisation nuclease domain.
Relaxase/Mobilisation nuclease domain {ECO:0000313|EMBL:CBK77649.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_058_072G1_scaffold_512_21
unknown

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16326..16652
DNA (327bp) protein (109aa)

This feature has no annotations

L3_058_072G1_scaffold_512_22
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16966..17535
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5US71_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:EES48718.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
hypothetical protein
L3_058_072G1_scaffold_512_23
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17668..18165
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YNI6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJU72394.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_058_072G1_scaffold_512_24
Clostridium haemolyticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18362..19297
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P50 RepID=T4R2N2_CLODI
Uncharacterized protein {ECO:0000313|EMBL:KGN03869.1}; TaxID=1443115 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium haemolyticum NCTC 8350.;"
L3_058_072G1_scaffold_512_25
unknown

Not on your lists

19310..19624
DNA (315bp) protein (105aa)

This feature has no annotations

L3_058_072G1_scaffold_512_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19657..20553)
DNA (897bp) protein (299aa)
SOS-response transcriptional repressor n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V1H8_CLOPF
SOS-response transcriptional repressor {ECO:0000313|EMBL:EDT72312.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
transcription regulator phage-related
L3_058_072G1_scaffold_512_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20898..21359)
DNA (462bp) protein (154aa)
Transcriptional regulator XRE n=1 Tax=Clostridium perfringens RepID=K9MEA8_CLOPF
Transcriptional regulator XRE {ECO:0000313|EMBL:AFV15095.1}; TaxID=1502 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens.;"
HTH domain-containing protein
L3_058_072G1_scaffold_512_28
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21578..21919
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum BC1 RepID=R4JYL7_CLOPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK95393.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
L3_058_072G1_scaffold_512_29
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22030..22851
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FR78_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81457.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_058_072G1_scaffold_512_30
unknown

Not on your lists

22940..23122
DNA (183bp) protein (61aa)

This feature has no annotations

Displaying items 1-30 of 37 in total

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