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L3_058_072G1_scaffold_514

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_072G1_scaffold_514_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..731)
DNA (729bp) protein (243aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GJ79_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95187.1}; Flags: Fragment;; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_058_072G1_scaffold_514_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1012..1500
DNA (489bp) protein (163aa)
RNA polymerase sigma factor n=4 Tax=Clostridium RepID=E7GJ78_CLOSY
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
ECF subfamily RNA polymerase sigma-24 subunit
L3_058_072G1_scaffold_514_3
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1497..2525
DNA (1029bp) protein (343aa)
Uncharacterized protein n=3 Tax=Clostridium symbiosum RepID=U2D6X1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95185.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_058_072G1_scaffold_514_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2788..3936
DNA (1149bp) protein (383aa)
Transporter, major facilitator family protein n=2 Tax=Clostridium symbiosum RepID=E9SNK1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95184.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
major facilitator superfamily protein
L3_058_072G1_scaffold_514_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4071..4925)
DNA (855bp) protein (285aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=4 Tax=Clostridium RepID=U2BTW4_CLOSY
L3_058_072G1_scaffold_514_6
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4864..5037)
DNA (174bp) protein (58aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=4 Tax=Clostridium RepID=U2BTW4_CLOSY
L3_058_072G1_scaffold_514_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5211..5885
DNA (675bp) protein (225aa)
Uncharacterized protein n=2 Tax=Clostridium symbiosum RepID=E9SNJ9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95182.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_058_072G1_scaffold_514_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5923..7329
DNA (1407bp) protein (469aa)
Cellulose acetylase n=3 Tax=Clostridium RepID=E7GJ73_CLOSY
Cellulose acetylase {ECO:0000313|EMBL:EGA95181.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Predicted membrane protein involved in D-alanine export
L3_058_072G1_scaffold_514_9
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7346..8548
DNA (1203bp) protein (401aa)
Uncharacterized protein n=2 Tax=Clostridium symbiosum RepID=E9SNJ7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF07331.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_058_072G1_scaffold_514_10
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9058..10419
DNA (1362bp) protein (454aa)
MATE efflux family protein n=4 Tax=Clostridium RepID=E7GJ71_CLOSY
MATE efflux family protein {ECO:0000313|EMBL:EGA95179.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
putative efflux protein, MATE family
L3_058_072G1_scaffold_514_11
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10508..11419)
DNA (912bp) protein (304aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=U2D6T5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF07333.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_058_072G1_scaffold_514_12
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11691..13367
DNA (1677bp) protein (559aa)
Sodium-dependent phosphate transporter n=4 Tax=Clostridium RepID=E7GJ69_CLOSY
Sodium-dependent phosphate transporter {ECO:0000313|EMBL:EGA95177.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Na/Pi-cotransporter
L3_058_072G1_scaffold_514_13
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13453..14481)
DNA (1029bp) protein (343aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F8D6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF07335.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
putative transporter
L3_058_072G1_scaffold_514_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14814..16061)
DNA (1248bp) protein (416aa)
Sodium/glutamate symporter carrier protein n=4 Tax=Clostridium RepID=E7GJ67_CLOSY
Sodium/glutamate symporter carrier protein {ECO:0000313|EMBL:EGA95175.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Na+/glutamate symporter
L3_058_072G1_scaffold_514_15
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16375..17061)
DNA (687bp) protein (229aa)
Transcriptional regulatory protein n=3 Tax=Clostridium symbiosum RepID=E7GJ66_CLOSY
Transcriptional regulatory protein {ECO:0000256|PIRNR:PIRNR006171}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Response regulator of citrate/malate metabolism
L3_058_072G1_scaffold_514_16
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17061..18689)
DNA (1629bp) protein (543aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F8D9_9CLOT
two-component histidine kinase
L3_058_072G1_scaffold_514_17
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18952..19965
DNA (1014bp) protein (338aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase, type I n=4 Tax=Clostridium RepID=E9SNI8_CLOSY
L3_058_072G1_scaffold_514_18
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20151..21356
DNA (1206bp) protein (402aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
3-phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=2 Tax=Clostridium RepID=E7GJ63_CLOSY
L3_058_072G1_scaffold_514_19
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21417..22166
DNA (750bp) protein (250aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=4 Tax=Clostridium RepID=E7GJ62_CLOSY
L3_058_072G1_scaffold_514_20
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22393..23103
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BTV3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI75218.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
protein tyrosine/serine phosphatase
L3_058_072G1_scaffold_514_21
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23153..25087
DNA (1935bp) protein (645aa)
Diguanylate cyclase n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GJ60_CLOSY
Diguanylate cyclase {ECO:0000313|EMBL:EGA95168.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_058_072G1_scaffold_514_22
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25338..26879
DNA (1542bp) protein (514aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=3 Tax=Clostridium RepID=E7GJ59_CLOSY
L3_058_072G1_scaffold_514_23
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26985..27812)
DNA (828bp) protein (276aa)
LPXTG-motif cell wall anchor domain protein n=2 Tax=Clostridium symbiosum RepID=E9SNI2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95166.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_058_072G1_scaffold_514_24
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27960..29729
DNA (1770bp) protein (590aa)
ABC transporter, ATP-binding protein n=4 Tax=Clostridium RepID=E9SNI1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF07346.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
ABC transporter
L3_058_072G1_scaffold_514_25
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29745..30608
DNA (864bp) protein (288aa)
EDD domain protein, DegV family n=4 Tax=Clostridium RepID=E9SNI0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF07347.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
degV family protein
L3_058_072G1_scaffold_514_26
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30619..32061
DNA (1443bp) protein (481aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Signal transduction histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BAT0_CLOSY
L3_058_072G1_scaffold_514_27
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32089..33009
DNA (921bp) protein (307aa)
Spore germination protein n=3 Tax=Clostridium RepID=E7GJ54_CLOSY
Spore germination protein {ECO:0000313|EMBL:EGA95162.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Spore germination protein
L3_058_072G1_scaffold_514_28
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33262..35559
DNA (2298bp) protein (766aa)
DNA internalization-like competence protein ComEC/Rec2 n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F8F1_9CLOT
DNA internalization-like competence protein ComEC/Rec2 {ECO:0000313|EMBL:EHF07350.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
DNA internalization-related competence protein ComEC/Rec2
Displaying 28 items

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