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L3_058_072G1_scaffold_541

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_072G1_scaffold_541_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(155..1177)
DNA (1023bp) protein (341aa)
Anaerobic sulfite reductase n=3 Tax=Clostridium symbiosum RepID=E7GH35_CLOSY
Sulfite reductase, subunit C {ECO:0000313|EMBL:ERI79080.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
anaerobic sulfite reductase subunit C
L3_058_072G1_scaffold_541_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1191..1991)
DNA (801bp) protein (267aa)
Sulfite reductase, subunit B n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2DHI5_CLOSY
Sulfite reductase, subunit B {ECO:0000313|EMBL:ERI79081.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
anaerobic sulfite reductase subunit B
L3_058_072G1_scaffold_541_3
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1981..3042)
DNA (1062bp) protein (354aa)
Sulfite reductase, subunit A n=2 Tax=Clostridium RepID=G5FDW2_9CLOT
Sulfite reductase, subunit A {ECO:0000313|EMBL:EHF05419.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
asrA; sulfite reductase, subunit A
L3_058_072G1_scaffold_541_4
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3331..4212
DNA (882bp) protein (294aa)
LysR substrate binding domain protein n=2 Tax=Clostridium RepID=E9SJV9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05418.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
LysR substrate binding domain family protein
L3_058_072G1_scaffold_541_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4322..5170)
DNA (849bp) protein (283aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GH31_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95927.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_058_072G1_scaffold_541_6
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5202..6611)
DNA (1410bp) protein (470aa)
Na+/H+ antiporter NhaC n=2 Tax=Clostridium RepID=G5FDV9_9CLOT
Na+/H+ antiporter NhaC {ECO:0000313|EMBL:EHF05416.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
mleN
L3_058_072G1_scaffold_541_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6642..7370)
DNA (729bp) protein (243aa)
Peptidase C26 n=2 Tax=Clostridium symbiosum RepID=E9SJW2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95925.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
peptidase C26
L3_058_072G1_scaffold_541_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7611..9632)
DNA (2022bp) protein (674aa)
Sigma-54 interaction domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SJW3_CLOSY
Anaerobic nitric oxide reductase transcription regulator {ECO:0000313|EMBL:EGA95924.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
putative sigma54 specific transcriptional regulator
L3_058_072G1_scaffold_541_9
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9859..10953
DNA (1095bp) protein (365aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase n=2 Tax=Clostridium RepID=E7GH27_CLOSY
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EGA95923.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_058_072G1_scaffold_541_10
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11331..11993
DNA (663bp) protein (221aa)
ATP synthase F0 subcomplex A subunit (EC:3.6.3.14)
ATP synthase subunit a n=4 Tax=Clostridium RepID=E7GH26_CLOSY
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_058_072G1_scaffold_541_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12033..12257
DNA (225bp) protein (75aa)
ATP synthase F0 subcomplex C subunit (EC:3.6.3.14)
ATP synthase F0, C subunit n=4 Tax=Clostridium RepID=U2C4X4_CLOSY
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_058_072G1_scaffold_541_12
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12280..12777
DNA (498bp) protein (166aa)
ATP synthase subunit b n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FDV3_9CLOT
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
ATP synthase F0 subunit B
L3_058_072G1_scaffold_541_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12758..13261
DNA (504bp) protein (168aa)
ATP synthase, F1 delta subunit (EC:3.6.3.14)
ATP synthase subunit delta n=3 Tax=Clostridium RepID=E7GH23_CLOSY
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_058_072G1_scaffold_541_14
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13267..14778
DNA (1512bp) protein (504aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
ATP synthase subunit alpha n=2 Tax=Clostridium RepID=G5FDV1_9CLOT
ATP synthase F1 subunit alpha
L3_058_072G1_scaffold_541_15
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14785..15684
DNA (900bp) protein (300aa)
ATP synthase, F1 gamma subunit (EC:3.6.3.14)
ATP synthase gamma chain n=4 Tax=Clostridium RepID=E7GH21_CLOSY
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_058_072G1_scaffold_541_16
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15687..17102
DNA (1416bp) protein (472aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
ATP synthase F1 subcomplex beta subunit (EC:3.6.3.14)
ATP synthase subunit beta n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FDU9_9CLOT
L3_058_072G1_scaffold_541_17
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17105..17521
DNA (417bp) protein (139aa)
ATP synthase F1 subcomplex epsilon subunit (EC:3.6.3.14)
ATP synthase epsilon chain n=4 Tax=Clostridium RepID=E7GH19_CLOSY
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_058_072G1_scaffold_541_18
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17818..18792)
DNA (975bp) protein (325aa)
Transcriptional regulator n=4 Tax=Clostridium RepID=E7GH18_CLOSY
Transcriptional regulator {ECO:0000313|EMBL:EGA95914.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
ArsR family transcriptional regulator
L3_058_072G1_scaffold_541_19
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19019..20056
DNA (1038bp) protein (346aa)
Sugar-binding domain protein n=4 Tax=Clostridium RepID=E9SJX4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05403.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Ribose ABC transport system, periplasmic ribose-binding protein RbsB
L3_058_072G1_scaffold_541_20
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20306..21829
DNA (1524bp) protein (508aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium symbiosum RepID=U2DCB8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95912.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
sugar ABC transporter ATPase
L3_058_072G1_scaffold_541_21
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21822..22781
DNA (960bp) protein (320aa)
Branched-chain amino acid ABC transporter, permease protein n=2 Tax=Clostridium symbiosum RepID=E9SJX6_CLOSY
Putative ribose ABC transporter permease protein {ECO:0000313|EMBL:ERI79098.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
ABC transporter
L3_058_072G1_scaffold_541_22
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22795..23793
DNA (999bp) protein (333aa)
Monosaccharide-transporting ATPase n=3 Tax=Clostridium RepID=E7GH14_CLOSY
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:EGA95910.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
sugar ABC transporter permease
L3_058_072G1_scaffold_541_23
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23797..25647
DNA (1851bp) protein (617aa)
Glycosyl hydrolase family 2, sugar binding domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SJX8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05399.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
glycoside hydrolase family protein
L3_058_072G1_scaffold_541_24
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25759..26556
DNA (798bp) protein (266aa)
Uncharacterized protein n=3 Tax=Clostridium symbiosum RepID=U2DHK4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95908.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_058_072G1_scaffold_541_25
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26692..27810)
DNA (1119bp) protein (373aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GH11_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95907.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_058_072G1_scaffold_541_26
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28055..29572)
DNA (1518bp) protein (506aa)
Transporter, betaine/carnitine/choline family n=3 Tax=Clostridium RepID=E9SJY1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95906.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Choline-glycine betaine transporter
Displaying 26 items

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