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L3_058_072G1_scaffold_659

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_072G1_scaffold_659_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..179)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AFH1_CLOBU
Mobile element protein {ECO:0000313|EMBL:KJZ85108.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative transposase
L3_058_072G1_scaffold_659_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(552..1364)
DNA (813bp) protein (271aa)
folB; dihydroneopterin aldolase (EC:4.1.2.25)
Bifunctional folate synthesis protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KI45_CLOBU
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase {ECO:0000313|EMBL:ENZ30868.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L3_058_072G1_scaffold_659_3
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1422..2264)
DNA (843bp) protein (281aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
folP; dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase n=4 Tax=Clostridium butyricum RepID=B1QWQ1_CLOBU
L3_058_072G1_scaffold_659_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2335..2811)
DNA (477bp) protein (159aa)
Hdig domain protein n=2 Tax=Clostridium butyricum RepID=B1QWQ2_CLOBU
Hdig domain protein {ECO:0000313|EMBL:EEP55907.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L3_058_072G1_scaffold_659_5
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3161..4045)
DNA (885bp) protein (295aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
dapA3; 4-hydroxy-tetrahydrodipicolinate synthase DapA (EC:4.3.3.7)
4-hydroxy-tetrahydrodipicolinate synthase n=2 Tax=Clostridium butyricum RepID=M8JND5_CLOBU
L3_058_072G1_scaffold_659_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4481..5656
DNA (1176bp) protein (392aa)
Cation diffusion facilitator family transporter n=2 Tax=Clostridium butyricum RepID=M8K9V5_CLOBU
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ENZ30872.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
cation diffusion facilitator family transporter
L3_058_072G1_scaffold_659_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5720..7774)
DNA (2055bp) protein (685aa)
pepO2; neutral endopeptidase PepO (EC:3.4.24.-)
Peptidase family M13 n=2 Tax=Clostridium butyricum RepID=B1QWQ5_CLOBU
Endopeptidase O {ECO:0000313|EMBL:KJZ85080.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L3_058_072G1_scaffold_659_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8163..8885)
DNA (723bp) protein (241aa)
Glutamine transport ATP-binding protein GlnQ n=4 Tax=Clostridium butyricum RepID=B1QWQ6_CLOBU
Glutamine transport ATP-binding protein GlnQ {ECO:0000313|EMBL:EEP55856.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
artM; arginine transport ATP-binding protein ArtM
L3_058_072G1_scaffold_659_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8872..9531)
DNA (660bp) protein (220aa)
Glutamine ABC transporter, permease/substrate-binding protein n=3 Tax=Clostridium butyricum RepID=B1QWQ7_CLOBU
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:EEP55766.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
amino acid ABC transporter substrate-binding protein/permease
L3_058_072G1_scaffold_659_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9813..10631)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YTE5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30876.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
extracellular solute-binding protein
L3_058_072G1_scaffold_659_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11178..13355)
DNA (2178bp) protein (726aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AFI0_CLOBU
helicase
L3_058_072G1_scaffold_659_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13608..15755)
DNA (2148bp) protein (716aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A313_CLOBU
ATP-dependent metalloprotease FtsH
L3_058_072G1_scaffold_659_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15783..16001)
DNA (219bp) protein (73aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JE63_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30879.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L3_058_072G1_scaffold_659_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16177..16725)
DNA (549bp) protein (183aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
lepB; signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=4 Tax=Clostridium butyricum RepID=B1QWR2_CLOBU
L3_058_072G1_scaffold_659_15
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16833..17399)
DNA (567bp) protein (189aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
Signal peptidase I n=2 Tax=Clostridium butyricum RepID=M8JNC7_CLOBU
signal peptidase I
L3_058_072G1_scaffold_659_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17571..18137)
DNA (567bp) protein (189aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Signal peptidase I n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AFI5_CLOBU
signal peptidase I
L3_058_072G1_scaffold_659_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18614..19909)
DNA (1296bp) protein (432aa)
lysA; diaminopimelate decarboxylase LysA (EC:4.1.1.20)
Diaminopimelate decarboxylase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A317_CLOBU
Diaminopimelate decarboxylase {ECO:0000313|EMBL:KHD15529.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
L3_058_072G1_scaffold_659_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20577..21254)
DNA (678bp) protein (226aa)
Dihydrodipicolinate synthase/N-acetylneuraminate lyase n=2 Tax=Clostridium butyricum RepID=B1QWR6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85241.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
enzyme with TIM-barrel fold
L3_058_072G1_scaffold_659_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21987..22772
DNA (786bp) protein (262aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QWR8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP55923.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L3_058_072G1_scaffold_659_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22765..23697
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YTF4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85280.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
Displaying 20 items

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