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L3_058_072G1_scaffold_717

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_072G1_scaffold_717_1
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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1..114
DNA (114bp) protein (38aa)
UPI0003D591B5 related cluster n=1 Tax=unknown RepID=UPI0003D591B5
Uncharacterized protein {ECO:0000313|EMBL:ETI87406.1}; Flags: Fragment;; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L3_058_072G1_scaffold_717_2
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

447..1511
DNA (1065bp) protein (355aa)
UPI0003D656A1 related cluster n=1 Tax=unknown RepID=UPI0003D656A1
Uncharacterized protein {ECO:0000313|EMBL:ETI87407.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
3D domain-containing protein
L3_058_072G1_scaffold_717_3
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1657..2154
DNA (498bp) protein (166aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D5A6FD related cluster n=1 Tax=unknown RepID=UPI0003D5A6FD
crossover junction endodeoxyribonuclease ruvC
L3_058_072G1_scaffold_717_4
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2151..2759
DNA (609bp) protein (203aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
ruvA; putative Holliday junction ATP-dependent DNA helicase RuvA (EC:3.6.4.12)
UPI0003D5BEC4 related cluster n=1 Tax=unknown RepID=UPI0003D5BEC4
L3_058_072G1_scaffold_717_5
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2762..3799
DNA (1038bp) protein (346aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D65022 related cluster n=1 Tax=unknown RepID=UPI0003D65022
Holliday junction DNA helicase RuvB
L3_058_072G1_scaffold_717_6
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3792..3998
DNA (207bp) protein (69aa)
UPI0003D5AAC3 related cluster n=1 Tax=unknown RepID=UPI0003D5AAC3
Uncharacterized protein {ECO:0000313|EMBL:ETI87411.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L3_058_072G1_scaffold_717_7
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4003..5355
DNA (1353bp) protein (451aa)
UPI0003D64778 related cluster n=1 Tax=unknown RepID=UPI0003D64778
Uncharacterized protein {ECO:0000313|EMBL:KGF07721.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
SpoIID/LytB domain protein
L3_058_072G1_scaffold_717_8
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5370..6386
DNA (1017bp) protein (339aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D5D2C1 related cluster n=1 Tax=unknown RepID=UPI0003D5D2C1
S-adenosylmethionine:tRNA ribosyltransferase-isomerase
L3_058_072G1_scaffold_717_9
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6394..7506
DNA (1113bp) protein (371aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D5E75B related cluster n=1 Tax=unknown RepID=UPI0003D5E75B
queuine tRNA-ribosyltransferase
L3_058_072G1_scaffold_717_10
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7594..7929
DNA (336bp) protein (112aa)
UPI0003D5C976 related cluster n=1 Tax=unknown RepID=UPI0003D5C976
Preprotein translocase {ECO:0000313|EMBL:ETI87288.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
preprotein translocase
L3_058_072G1_scaffold_717_11
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7922..8494
DNA (573bp) protein (191aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D679EF related cluster n=1 Tax=unknown RepID=UPI0003D679EF
5-formyltetrahydrofolate cyclo-ligase
L3_058_072G1_scaffold_717_12
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8518..9744
DNA (1227bp) protein (409aa)
UPI0003D5BFE9 related cluster n=1 Tax=unknown RepID=UPI0003D5BFE9
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
protein-export membrane protein SecD
L3_058_072G1_scaffold_717_13
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9741..10652
DNA (912bp) protein (304aa)
UPI0003D68086 related cluster n=1 Tax=unknown RepID=UPI0003D68086
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
protein-export membrane protein SecF
L3_058_072G1_scaffold_717_14
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10941..12092
DNA (1152bp) protein (384aa)
UPI0003D61E8E related cluster n=1 Tax=unknown RepID=UPI0003D61E8E
Type II secretion system protein E GspE {ECO:0000313|EMBL:ETI88002.1}; Flags: Fragment;; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
type II secretion system protein E
L3_058_072G1_scaffold_717_15
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12082..13116
DNA (1035bp) protein (345aa)
UPI0003D5F0C6 related cluster n=1 Tax=unknown RepID=UPI0003D5F0C6
4-diphosphocytidyl-2C-methyl-D-erythritol kinase {ECO:0000313|EMBL:ETI88003.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
twitching motility protein
L3_058_072G1_scaffold_717_16
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13095..14222
DNA (1128bp) protein (376aa)
UPI0003D5D1B2 related cluster n=1 Tax=unknown RepID=UPI0003D5D1B2
Type II secretion system F protein {ECO:0000313|EMBL:ETI88004.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
type II secretion system protein
L3_058_072G1_scaffold_717_17
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14287..14670
DNA (384bp) protein (128aa)
UPI0003D5E785 related cluster n=1 Tax=unknown RepID=UPI0003D5E785
Uncharacterized protein {ECO:0000313|EMBL:ETI88005.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hofG; general secretion pathway protein G
L3_058_072G1_scaffold_717_18
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14667..15299
DNA (633bp) protein (211aa)
UPI0003D601A2 related cluster n=1 Tax=unknown RepID=UPI0003D601A2
Type IV prepillin peptidase PilD {ECO:0000313|EMBL:ETI88006.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L3_058_072G1_scaffold_717_19
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15292..15756
DNA (465bp) protein (155aa)
UPI0003D5EEC1 related cluster n=1 Tax=unknown RepID=UPI0003D5EEC1
Uncharacterized protein {ECO:0000313|EMBL:ETI88007.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L3_058_072G1_scaffold_717_20
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15753..16124
DNA (372bp) protein (124aa)
UPI0003D5BB85 related cluster n=1 Tax=unknown RepID=UPI0003D5BB85
Uncharacterized protein {ECO:0000313|EMBL:ETI88008.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L3_058_072G1_scaffold_717_21
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16117..16638
DNA (522bp) protein (174aa)
UPI0003D5A686 related cluster n=1 Tax=unknown RepID=UPI0003D5A686
Uncharacterized protein {ECO:0000313|EMBL:ETI88009.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L3_058_072G1_scaffold_717_22
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16625..17032
DNA (408bp) protein (136aa)
UPI0003D5F338 related cluster n=1 Tax=unknown RepID=UPI0003D5F338
Uncharacterized protein {ECO:0000313|EMBL:ETI88010.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L3_058_072G1_scaffold_717_23
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16999..18318
DNA (1320bp) protein (440aa)
UPI0003D5DDD8 related cluster n=1 Tax=unknown RepID=UPI0003D5DDD8
Uncharacterized protein {ECO:0000313|EMBL:ETI88011.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L3_058_072G1_scaffold_717_24
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18302..18760
DNA (459bp) protein (153aa)
UPI0003D5912A related cluster n=1 Tax=unknown RepID=UPI0003D5912A
Uncharacterized protein {ECO:0000313|EMBL:KGF07707.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
L3_058_072G1_scaffold_717_25
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18888..19850
DNA (963bp) protein (321aa)
UPI0003D5EB9E related cluster n=1 Tax=unknown RepID=UPI0003D5EB9E
Cation efflux family protein {ECO:0000313|EMBL:ETI86476.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
cation diffusion facilitator family transporter
L3_058_072G1_scaffold_717_26
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19847..20914
DNA (1068bp) protein (356aa)
UPI0003D5B9DD related cluster n=1 Tax=unknown RepID=UPI0003D5B9DD
Uncharacterized protein {ECO:0000313|EMBL:KGF07705.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
ADP-ribosylglycohydrolase
Displaying 26 items

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