ggKbase home page

L3_058_072G1_scaffold_763

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_072G1_scaffold_763_1
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

637..1620
DNA (984bp) protein (328aa)
Cell wall-binding repeat protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BFB2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF07464.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
cell wall binding repeat-containing protein
L3_058_072G1_scaffold_763_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1645..2442
DNA (798bp) protein (266aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SNR6_CLOSY
L3_058_072G1_scaffold_763_3
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2519..3118
DNA (600bp) protein (200aa)
Hydrolase, NUDIX family n=2 Tax=Clostridium symbiosum RepID=E9SNR5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95145.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
NUDIX hydrolase
L3_058_072G1_scaffold_763_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3218..3763
DNA (546bp) protein (182aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=U2D5R9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95144.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_058_072G1_scaffold_763_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4024..4872
DNA (849bp) protein (283aa)
Tyrosine recombinase XerC n=4 Tax=Clostridium RepID=E7GJA1_CLOSY
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
tyrosine recombinase XerD subunit
L3_058_072G1_scaffold_763_6
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5021..6097)
DNA (1077bp) protein (359aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Sensor histidine kinase n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GJA0_CLOSY
Signal transduction histidine kinase
L3_058_072G1_scaffold_763_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6094..6771)
DNA (678bp) protein (226aa)
Winged helix family Two component transcriptional regulator n=4 Tax=Clostridium RepID=E7GJ99_CLOSY
Winged helix family Two component transcriptional regulator {ECO:0000313|EMBL:EGA95141.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_058_072G1_scaffold_763_8
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7031..8215
DNA (1185bp) protein (395aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SNR0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF07471.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
RND family efflux transporter, MFP subunit
L3_058_072G1_scaffold_763_9
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8234..11248
DNA (3015bp) protein (1005aa)
RND transporter, HAE1/HME family, permease protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SNQ9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF07472.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Cation/multidrug efflux pump
L3_058_072G1_scaffold_763_10
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11304..12476
DNA (1173bp) protein (391aa)
Uncharacterized protein n=2 Tax=Clostridium symbiosum RepID=E9SNQ8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95138.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_058_072G1_scaffold_763_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12489..13706
DNA (1218bp) protein (406aa)
Uncharacterized protein n=3 Tax=Clostridium symbiosum RepID=E9SNQ7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95137.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Outer membrane efflux protein.
L3_058_072G1_scaffold_763_12
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13830..14312)
DNA (483bp) protein (161aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9SNQ6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95136.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_058_072G1_scaffold_763_13
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14521..18810)
DNA (4290bp) protein (1430aa)
Putative uncharacterized protein n=4 Tax=Clostridium RepID=G5F844_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF07476.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
CoA-substrate-specific enzyme activase, putative
Displaying 13 items

View Taxonomy