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L3_058_072G1_scaffold_767

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_072G1_scaffold_767_1
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..390
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X7M5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA10820.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
ABC-type multidrug transport system, ATPase and permease components
L3_058_072G1_scaffold_767_2
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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381..2123
DNA (1743bp) protein (581aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XPU1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA10821.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
ABC transporter
L3_058_072G1_scaffold_767_3
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2605..3003
DNA (399bp) protein (133aa)
Hydrolase, carbon-nitrogen family n=2 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACT4_9FIRM
Hydrolase, carbon-nitrogen family {ECO:0000313|EMBL:EDQ95743.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
L3_058_072G1_scaffold_767_4
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3168..3569
DNA (402bp) protein (134aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0ACT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA10823.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L3_058_072G1_scaffold_767_5
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3840..4550
DNA (711bp) protein (237aa)
RelA/SpoT domain protein n=2 Tax=Clostridiales RepID=B0ACT6_9FIRM
RelA/SpoT domain protein {ECO:0000313|EMBL:CDA10824.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L3_058_072G1_scaffold_767_6
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4658..5335
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X7M8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA10825.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
membrane protein
L3_058_072G1_scaffold_767_7
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5420..6724)
DNA (1305bp) protein (435aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Phosphomethylpyrimidine synthase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XPU6_9CLOT
hypothetical protein
L3_058_072G1_scaffold_767_8
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7231..7545
DNA (315bp) protein (105aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5Y2A9_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDA10827.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
helix-turn-helix domain-containing protein
L3_058_072G1_scaffold_767_9
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7535..8257
DNA (723bp) protein (241aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5Y2A9_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDA10827.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
DNA-binding protein
L3_058_072G1_scaffold_767_10
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8350..8541
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X556_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA10828.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L3_058_072G1_scaffold_767_11
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8541..9461
DNA (921bp) protein (307aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XEI9_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA10829.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
ABC transporter
L3_058_072G1_scaffold_767_12
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9458..10222
DNA (765bp) protein (255aa)
UPI0003D5B8C4 related cluster n=1 Tax=unknown RepID=UPI0003D5B8C4
Uncharacterized protein {ECO:0000313|EMBL:ETI96220.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
hypothetical protein
L3_058_072G1_scaffold_767_13
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10310..11197)
DNA (888bp) protein (296aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XPV1_9CLOT
dapA2; dihydrodipicolinate synthase
L3_058_072G1_scaffold_767_14
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11369..11518
DNA (150bp) protein (50aa)
NifU-like protein n=2 Tax=Clostridiales RepID=B0ACU5_9FIRM
NifU-like protein {ECO:0000313|EMBL:EDQ95754.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L3_058_072G1_scaffold_767_15
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11640..13136
DNA (1497bp) protein (499aa)
YjeF domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X560_9CLOT
YjeF domain protein {ECO:0000313|EMBL:CDA10833.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
carbohydrate kinase
L3_058_072G1_scaffold_767_16
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13234..13752
DNA (519bp) protein (173aa)
Nodulation efficiency protein D n=2 Tax=Clostridiales RepID=B0ACU7_9FIRM
Nodulation efficiency protein D {ECO:0000313|EMBL:CDA10834.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L3_058_072G1_scaffold_767_17
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13766..14752
DNA (987bp) protein (329aa)
SPFH/Band 7/PHB domain protein n=2 Tax=Clostridiales RepID=B0ACU8_9FIRM
SPFH/Band 7/PHB domain protein {ECO:0000313|EMBL:CDA10835.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L3_058_072G1_scaffold_767_18
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15062..17101
DNA (2040bp) protein (680aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
glgB; 1,4-alpha-glucan-branching enzyme GlgB (EC:2.4.1.18)
UPI0003D68E48 related cluster n=1 Tax=unknown RepID=UPI0003D68E48
L3_058_072G1_scaffold_767_19
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17307..18437
DNA (1131bp) protein (377aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
glgC; Glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=2 Tax=Clostridiales RepID=B0ACV0_9FIRM
L3_058_072G1_scaffold_767_20
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18500..19630
DNA (1131bp) protein (377aa)
Glucose-1-phosphate adenylyltransferase GlgD subunit n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X564_9CLOT
Glucose-1-phosphate adenylyltransferase GlgD subunit {ECO:0000313|EMBL:CDA10838.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
glgD; glycogen biosynthesis protein
L3_058_072G1_scaffold_767_21
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19648..21084
DNA (1437bp) protein (479aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
glgA; Glycogen synthase (Starch [bacterial glycogen]synthase) (EC:2.4.1.21)
Glycogen synthase n=2 Tax=Clostridiales RepID=B0ACV2_9FIRM
L3_058_072G1_scaffold_767_22
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21241..23673
DNA (2433bp) protein (811aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
glgP; Glycogen phosphorylase (EC:2.4.1.1)
Phosphorylase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACV3_9FIRM
L3_058_072G1_scaffold_767_23
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23642..25555
DNA (1914bp) protein (638aa)
alpha-amylase (EC:3.2.1.-)
Alpha amylase, catalytic domain protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACV4_9FIRM
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EDQ95763.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
L3_058_072G1_scaffold_767_24
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25624..26052)
DNA (429bp) protein (143aa)
Single-stranded DNA-binding protein n=2 Tax=Clostridiales RepID=B0ACV5_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
single-stranded DNA-binding protein
L3_058_072G1_scaffold_767_25
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26232..28133
DNA (1902bp) protein (634aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
PAS domain S-box protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X567_9CLOT
two-component sensor histidine kinase
L3_058_072G1_scaffold_767_26
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28200..29087
DNA (888bp) protein (296aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0ACV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETI95245.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
ATPase-like, ParA/MinD
L3_058_072G1_scaffold_767_27
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29209..29646
DNA (438bp) protein (146aa)
UPF0251 protein CLOBAR_02473 n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACV8_9FIRM
UPF0251 protein CLOBAR_02473 {ECO:0000256|HAMAP-Rule:MF_00674}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
UPF0251 protein
L3_058_072G1_scaffold_767_28
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29764..29964
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETI95247.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
L3_058_072G1_scaffold_767_29

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30193..30339
DNA (147bp) protein (49aa)
RHS repeat-associated core domain protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ16905.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Displaying 29 items

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