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L3_058_072G1_scaffold_949

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_072G1_scaffold_949_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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410..1999
DNA (1590bp) protein (530aa)
purH; IMP cyclohydrolase/Phosphoribosylaminoimidazolecarboxamideformyltransferase (EC:3.5.4.10 2.1.2.3)
Bifunctional purine biosynthesis protein PurH n=34 Tax=Escherichia coli RepID=D2NEP2_ECOS5
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
L3_058_072G1_scaffold_949_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2011..3300
DNA (1290bp) protein (430aa)
purD; Phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138, ECO:0000313|EMBL:CDN84843.1}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
Phosphoribosylamine--glycine ligase n=38 Tax=Escherichia coli RepID=D2NEP1_ECOS5
L3_058_072G1_scaffold_949_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3297..4622)
DNA (1326bp) protein (442aa)
Two-component regulator n=36 Tax=Escherichia coli RepID=D2NEP0_ECOS5
two-component regulator
Transcriptional regulator {ECO:0000313|EMBL:AJO86097.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_058_072G1_scaffold_949_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4619..5995)
DNA (1377bp) protein (459aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Two-component sensor kinase n=37 Tax=Escherichia coli RepID=D2NEN9_ECOS5
hydH; Sensor protein ZraS
L3_058_072G1_scaffold_949_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6233..6652
DNA (420bp) protein (140aa)
Zinc-binding periplasmic protein n=2 Tax=Escherichia coli RepID=D2NEN8_ECOS5
zraP; zinc resistance protein
Zinc resistance-associated protein {ECO:0000313|EMBL:KEJ54056.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
L3_058_072G1_scaffold_949_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6654..7289)
DNA (636bp) protein (212aa)
Uncharacterized protein n=49 Tax=Escherichia coli RepID=N1NFG0_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI57395.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
L3_058_072G1_scaffold_949_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7726..8316)
DNA (591bp) protein (197aa)
Uncharacterized protein n=45 Tax=Escherichia coli RepID=D2NEN5_ECOS5
yjaG; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJO86093.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_058_072G1_scaffold_949_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8359..9030)
DNA (672bp) protein (224aa)
endonuclease VIII (EC:3.1.21.7)
Endonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; EC=3.1.21.7 {ECO:0000256|HAMAP-Rule:MF_00801};; Deoxyinosine 3'endonuclease {ECO:0000256|HAMAP-Rule:MF_00801}; Deoxyribonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
Endonuclease V n=36 Tax=Escherichia coli RepID=D2NEN4_ECOS5
L3_058_072G1_scaffold_949_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9040..10104)
DNA (1065bp) protein (355aa)
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=868137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1E.;"
Uroporphyrinogen decarboxylase n=273 Tax=Escherichia RepID=DCUP_ECO27
L3_058_072G1_scaffold_949_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10144..10917)
DNA (774bp) protein (258aa)
nudC; NADH pyrophosphatase (EC:3.6.1.22)
NADH pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00297, ECO:0000256|SAAS:SAAS00016168}; EC=3.6.1.22 {ECO:0000256|HAMAP-Rule:MF_00297, ECO:0000256|SAAS:SAAS00016202};; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
NADH pyrophosphatase n=110 Tax=Escherichia RepID=NUDC_ECO7I
L3_058_072G1_scaffold_949_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11012..11488
DNA (477bp) protein (159aa)
Regulator of sigma D n=203 Tax=Escherichia RepID=RSD_ECO45
rsd; Regulator of sigma D
Regulator of sigma D {ECO:0000256|HAMAP-Rule:MF_01181, ECO:0000256|SAAS:SAAS00010112}; TaxID=868140 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2C.;"
L3_058_072G1_scaffold_949_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11721..13616
DNA (1896bp) protein (632aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
Phosphomethylpyrimidine synthase n=55 Tax=Escherichia RepID=D2NEN0_ECOS5
thiC; Thiamin biosynthesis protein ThiC
L3_058_072G1_scaffold_949_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13616..14251
DNA (636bp) protein (212aa)
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
Thiamine-phosphate synthase n=39 Tax=Escherichia coli RepID=D2NEM9_ECOS5
L3_058_072G1_scaffold_949_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14244..14999
DNA (756bp) protein (252aa)
Thiamine biosynthesis adenylyltransferase ThiF n=37 Tax=Escherichia coli RepID=D2NEM8_ECOS5
thiamine biosynthesis adenylyltransferase ThiF
Sulfur carrier protein adenylyltransferase ThiF {ECO:0000313|EMBL:CDL43793.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
L3_058_072G1_scaffold_949_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14983..15183
DNA (201bp) protein (67aa)
Sulfur carrier protein ThiS n=37 Tax=Escherichia coli RepID=D2NEM7_ECOS5
sulfur carrier protein ThiS
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:AJO86085.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_058_072G1_scaffold_949_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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15185..15955
DNA (771bp) protein (257aa)
Thiazole synthase n=36 Tax=Escherichia coli RepID=D2NEM6_ECOS5
thiamin biosynthesis protein ThiG
Thiazole synthase {ECO:0000313|EMBL:AJO86084.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_058_072G1_scaffold_949_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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15952..17085
DNA (1134bp) protein (378aa)
Thiamin biosynthesis protein ThiH n=48 Tax=Escherichia coli RepID=D2NEM5_ECOS5
thiH; Thiazole biosynthesis protein ThiH
Thiamine biosynthesis protein ThiH {ECO:0000313|EMBL:AJO86083.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_058_072G1_scaffold_949_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17327..20530)
DNA (3204bp) protein (1068aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
DNA-directed RNA polymerase subunit beta' n=1 Tax=Escherichia coli HVH 204 (4-3112802) RepID=T7WKH7_ECOLX
rpoC; DNA-directed RNA polymerase subunit beta'
Displaying 18 items

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