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L3_058_072G1_scaffold_278

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Displaying items 1-30 of 59 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_072G1_scaffold_278_1
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..738
DNA (738bp) protein (246aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:471 RepID=R7EB03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE00104.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
L3_058_072G1_scaffold_278_2
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

808..1392
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RML5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34112.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L3_058_072G1_scaffold_278_3
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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1609..2496
DNA (888bp) protein (296aa)
Tyrosine recombinase XerC n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R090_9FIRM
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
tyrosine recombinase XerD subunit
L3_058_072G1_scaffold_278_4
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(2638..3672)
DNA (1035bp) protein (345aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R5S7_9FIRM
L3_058_072G1_scaffold_278_5
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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comp(4195..5733)
DNA (1539bp) protein (513aa)
Putative stage V sporulation protein B n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QYT3_9FIRM
Putative stage V sporulation protein B {ECO:0000313|EMBL:CCZ34115.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Membrane protein involved in the export of O-antigen and teichoic acid
L3_058_072G1_scaffold_278_6
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

5882..6328
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RH57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34116.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
transcriptional regulator, BadM/Rrf2 family
L3_058_072G1_scaffold_278_7
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6349..7530
DNA (1182bp) protein (394aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331};; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
cysteine desulfurase NifS (EC:2.8.1.7)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:471 RepID=R7EBM1_9FIRM
L3_058_072G1_scaffold_278_8
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

7633..8076
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QYU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34125.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
FeS cluster assembly scaffold protein NifU, Clostridium type
L3_058_072G1_scaffold_278_9
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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8076..9149
DNA (1074bp) protein (358aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RMM4_9FIRM
L3_058_072G1_scaffold_278_10
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

9146..9937
DNA (792bp) protein (264aa)
histidinol phosphate phosphatase HisJ family (EC:3.1.3.15)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R5U0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34129.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L3_058_072G1_scaffold_278_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10078..11097
DNA (1020bp) protein (340aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase, type I n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8X4_9FIRM
L3_058_072G1_scaffold_278_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11205..12398
DNA (1194bp) protein (398aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
3-phosphoglycerate kinase (EC:2.7.2.3)
phosphoglycerate kinase n=1 Tax=Blautia producta RepID=UPI00036FF57A
L3_058_072G1_scaffold_278_13
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

12449..13198
DNA (750bp) protein (250aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RH78_9FIRM
L3_058_072G1_scaffold_278_14
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

13414..14700
DNA (1287bp) protein (429aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RH84_9FIRM
L3_058_072G1_scaffold_278_15
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

14881..15663
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RMN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34147.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L3_058_072G1_scaffold_278_16
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

15797..16486
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R0B8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34148.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Polar amino acid transport system permease
L3_058_072G1_scaffold_278_17
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16476..17219
DNA (744bp) protein (248aa)
amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) (EC:3.6.3.21)
Polar amino acid ABC transporter n=1 Tax=Blautia sp. CAG:52 RepID=R6H3H3_9FIRM
Polar amino acid ABC transporter {ECO:0000313|EMBL:CDB20842.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
L3_058_072G1_scaffold_278_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17537..18019
DNA (483bp) protein (161aa)
NADH:ubiquinone oxidoreductase 24 kD subunit (EC:1.6.5.3)
Uncharacterized protein n=2 Tax=Clostridiales RepID=C6JE07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76906.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_058_072G1_scaffold_278_19
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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18016..19896
DNA (1881bp) protein (627aa)
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit (EC:1.6.5.3)
4Fe-4S binding domain protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LCG1_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EET61625.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
L3_058_072G1_scaffold_278_20
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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19908..21596
DNA (1689bp) protein (563aa)
hydrogenases, Fe-only (EC:1.6.5.3)
Hydrogenases, Fe-only {ECO:0000313|EMBL:CBL19412.1}; EC=1.6.5.3 {ECO:0000313|EMBL:CBL19412.1};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Hydrogenases, Fe-only n=2 Tax=Clostridiales RepID=D4LHV1_9FIRM
L3_058_072G1_scaffold_278_21
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21667..23439
DNA (1773bp) protein (591aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2ACM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ23855.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
hypothetical protein
L3_058_072G1_scaffold_278_22
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23525..25600
DNA (2076bp) protein (692aa)
Polysaccharide biosynthesis protein n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7DCG1_9FIRM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CDD87598.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
capD; polysaccharide biosynthesis protein CapD-like
L3_058_072G1_scaffold_278_23
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

25868..26593
DNA (726bp) protein (242aa)
Capsular polysaccharide biosynthesis protein (EC:3.1.3.48)
Capsular polysaccharide biosynthesis protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R5Q9_9FIRM
Capsular polysaccharide biosynthesis protein {ECO:0000313|EMBL:CCZ34089.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L3_058_072G1_scaffold_278_24
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

26629..27378
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QYR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34090.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Capsular polysaccharide biosynthesis protein
L3_058_072G1_scaffold_278_25
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27382..28083
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6ND03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC09010.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
capsular exopolysaccharide family
L3_058_072G1_scaffold_278_26
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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28105..28992
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5WXG9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA04719.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
L3_058_072G1_scaffold_278_27
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

28989..29996
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QYR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34095.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
cell envelope-related transcriptional attenuator
L3_058_072G1_scaffold_278_28
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

29997..30812
DNA (816bp) protein (272aa)
SrtB family sortase n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RH43_9FIRM
SrtB family sortase {ECO:0000313|EMBL:CCZ34096.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
sortase, SrtB family
L3_058_072G1_scaffold_278_29
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

30836..31561
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RMK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34097.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L3_058_072G1_scaffold_278_30
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31696..33147
DNA (1452bp) protein (484aa)
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (EC:2.7.8.6)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Blautia sp. CAG:52 RepID=R6GHT2_9FIRM
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:CDB20841.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
Displaying items 1-30 of 59 in total

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