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L3_058_144G1_scaffold_36

Search features with annotation key words

Displaying items 1-30 of 234 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_144G1_scaffold_36_1
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..125)
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KBM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS43666.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
transposase IS200-family protein
L3_058_144G1_scaffold_36_2
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(464..3091)
DNA (2628bp) protein (876aa)
pyruvate phosphate dikinase (EC:2.7.9.1)
Pyruvate phosphate dikinase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HDJ2_9FIRM
Pyruvate phosphate dikinase {ECO:0000313|EMBL:CCY22932.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L3_058_144G1_scaffold_36_3
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(3395..4771)
DNA (1377bp) protein (459aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
glycyl-tRNA synthetase, dimeric type (EC:6.1.1.14)
Glycine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HDW2_9FIRM
L3_058_144G1_scaffold_36_4
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(4825..5421)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GZW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22930.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
hypothetical protein
L3_058_144G1_scaffold_36_5
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(5493..6134)
DNA (642bp) protein (214aa)
DNA repair protein RecO n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H4F8_9FIRM
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
recO; DNA repair protein RecO
L3_058_144G1_scaffold_36_6
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(6404..7321)
DNA (918bp) protein (306aa)
GTPase Era n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HDI5_9FIRM
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
GTP-binding protein Era
L3_058_144G1_scaffold_36_7
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(7318..8421)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HDV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22926.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
hypothetical protein
L3_058_144G1_scaffold_36_8
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(8476..11403)
DNA (2928bp) protein (976aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GZV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22925.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
peptidase M16
L3_058_144G1_scaffold_36_9
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(11438..11839)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H4F2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22924.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L3_058_144G1_scaffold_36_10
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(11856..12602)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H0B8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22923.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
RNA polymerase sigma factor sigma-70 family protein
L3_058_144G1_scaffold_36_11
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(12634..13521)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HDH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22922.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
hypothetical protein
L3_058_144G1_scaffold_36_12
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

14128..18357
DNA (4230bp) protein (1410aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HDV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22921.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
CoA-substrate-specific enzyme activase
L3_058_144G1_scaffold_36_13
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

18457..19620
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H0B3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22918.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Uncharacterized vancomycin resistance protein
L3_058_144G1_scaffold_36_14
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(19700..21142)
DNA (1443bp) protein (481aa)
Stage IV sporulation protein A n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HDH3_9FIRM
Stage IV sporulation protein A {ECO:0000313|EMBL:CCY22917.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
stage IV sporulation protein A
L3_058_144G1_scaffold_36_15
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(21272..22495)
DNA (1224bp) protein (408aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HDU6_9FIRM
L3_058_144G1_scaffold_36_16
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(22957..23268)
DNA (312bp) protein (104aa)
L-rhamnose mutarotase {ECO:0000256|SAAS:SAAS00048862}; EC=5.1.3.32 {ECO:0000256|SAAS:SAAS00169483};; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
rhaU; L-rhamnose 1-epimerase (EC:5.1.3.-)
L-rhamnose mutarotase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LNK9_9FIRM
L3_058_144G1_scaffold_36_17
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23279..24424)
DNA (1146bp) protein (382aa)
Putative glucoronyl hydrolase n=1 Tax=Clostridium sp. CAG:91 RepID=R6W2Y2_9CLOT
Putative glucoronyl hydrolase {ECO:0000313|EMBL:CDD01069.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
putative glucoronyl hydrolase
L3_058_144G1_scaffold_36_18
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

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24655..26502
DNA (1848bp) protein (616aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BDC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD63429.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
heparinase II/III family protein
L3_058_144G1_scaffold_36_19
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(26593..28122)
DNA (1530bp) protein (510aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H4G5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22934.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
putative membrane protein
L3_058_144G1_scaffold_36_20
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28109..28939)
DNA (831bp) protein (277aa)
Rhamnulose-1-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00770, ECO:0000256|SAAS:SAAS00048955}; EC=4.1.2.19 {ECO:0000256|HAMAP-Rule:MF_00770, ECO:0000256|SAAS:SAAS00048955};; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
L-rhamnulose 1-phosphate aldolase (EC:4.1.2.19)
rhamnulose-1-phosphate aldolase n=1 Tax=Butyrivibrio sp. AE3009 RepID=UPI0003B4D7BA
L3_058_144G1_scaffold_36_21
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(28951..30258)
DNA (1308bp) protein (436aa)
L-rhamnose isomerase {ECO:0000256|HAMAP-Rule:MF_00541}; EC=5.3.1.14 {ECO:0000256|HAMAP-Rule:MF_00541};; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L-rhamnose isomerase (EC:5.3.1.14)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000363EC46
L3_058_144G1_scaffold_36_22
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30201..31565)
DNA (1365bp) protein (455aa)
rhamnulokinase (EC:2.7.1.5)
Rhamnulokinase n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T8Z1_9CLOT
Rhamnulokinase {ECO:0000313|EMBL:CCZ59654.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
L3_058_144G1_scaffold_36_23
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31862..32860
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003746C4B
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDF44374.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
AraC family transcriptional regulator
L3_058_144G1_scaffold_36_24
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

32904..34316
DNA (1413bp) protein (471aa)
Amidophosphoribosyltransferase {ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|PIRNR:PIRNR000485}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HE95_9FIRM
L3_058_144G1_scaffold_36_25
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(34400..34921)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GX10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY21915.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Nitroreductase
L3_058_144G1_scaffold_36_26
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34951..36159)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JNA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS35613.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
conserved hypothetical protein
L3_058_144G1_scaffold_36_27
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36173..36982)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9N526_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS75167.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
ATPase
L3_058_144G1_scaffold_36_28
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

37078..37935
DNA (858bp) protein (286aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Methylenetetrahydrofolate reductase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HAZ5_9FIRM
5,10-methylenetetrahydrofolate reductase
L3_058_144G1_scaffold_36_29
unknown

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comp(38021..38560)
DNA (540bp) protein (180aa)

This feature has no annotations

L3_058_144G1_scaffold_36_30
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(38557..39417)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7JY10_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE68895.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Displaying items 1-30 of 234 in total

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