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L3_058_144G1_scaffold_18

Search features with annotation key words

Displaying items 1-30 of 297 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_144G1_scaffold_18_1
unknown

Not on your lists

1..213
DNA (213bp) protein (71aa)

This feature has no annotations

L3_058_144G1_scaffold_18_2
unknown

Not on your lists

350..583
DNA (234bp) protein (78aa)

This feature has no annotations

L3_058_144G1_scaffold_18_3
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1220..1945
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GDK0_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO36930.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_058_144G1_scaffold_18_4
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

1933..2265
DNA (333bp) protein (111aa)
Branched-chain amino acid transport protein AzlD n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6Q7H4_9FIRM
Branched-chain amino acid transport protein AzlD {ECO:0000313|EMBL:CDC26746.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
azlD; branched-chain amino acid transport protein AzlD
L3_058_144G1_scaffold_18_5
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2302..3492)
DNA (1191bp) protein (397aa)
Permease n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T5Q9_ROSHA
permease
Permease {ECO:0000313|EMBL:AEN98055.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_058_144G1_scaffold_18_6
unknown

Not on your lists

comp(3937..4596)
DNA (660bp) protein (220aa)

This feature has no annotations

L3_058_144G1_scaffold_18_7
Synergistes jonesii, Synergistes, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(4562..5233)
DNA (672bp) protein (224aa)
Methyltransferase domain protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y222_9BACT
Methylase {ECO:0000313|EMBL:KEJ91195.1}; TaxID=2754 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Synergistes.;" source="Synergistes jonesii.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L3_058_144G1_scaffold_18_8
[Eubacterium] nodatum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5384..5929)
DNA (546bp) protein (182aa)
Metallo-beta-lactamase domain protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7A7I1_9CLOT
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:ETJ99698.1}; TaxID=1161902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium nodatum ATCC 33099.;"
beta-lactamase
L3_058_144G1_scaffold_18_9
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5916..6239)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9J2D5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS28253.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
metal-dependent hydrolase, beta-lactamase superfamily II
L3_058_144G1_scaffold_18_10
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

comp(6263..7435)
DNA (1173bp) protein (391aa)
Amidohydrolase n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6E5U9_9FIRM
Amidohydrolase {ECO:0000313|EMBL:CDA92589.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
amidohydrolase
L3_058_144G1_scaffold_18_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7514..8926)
DNA (1413bp) protein (471aa)
C4-dicarboxylate anaerobic carrier n=4 Tax=Clostridium RepID=E7GKW4_CLOSY
C4-dicarboxylate anaerobic carrier {ECO:0000313|EMBL:ERI73868.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
putative transporter
L3_058_144G1_scaffold_18_12
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9044..9943
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Blautia hydrogenotrophica CAG:147 RepID=R5BWX9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX58744.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
LysR family transcriptional regulator
L3_058_144G1_scaffold_18_13
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10441..12984)
DNA (2544bp) protein (848aa)
putative copper-exporting P-type ATPase A (EC:3.6.3.-)
Copper-exporting ATPase n=1 Tax=Roseburia sp. CAG:45 RepID=R6NXQ6_9FIRM
Copper-exporting ATPase {ECO:0000313|EMBL:CDC11016.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
L3_058_144G1_scaffold_18_14
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12987..13295)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NRN6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC11014.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
hypothetical protein
L3_058_144G1_scaffold_18_15
unknown

Not on your lists

comp(13443..13565)
DNA (123bp) protein (41aa)

This feature has no annotations

L3_058_144G1_scaffold_18_16
[Eubacterium] nodatum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13605..14360)
DNA (756bp) protein (252aa)
Putative uncharacterized protein n=1 Tax=Eubacterium infirmum F0142 RepID=H1PK43_9FIRM
Acyl-ACP thioesterase {ECO:0000313|EMBL:ETJ98967.1}; TaxID=1161902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium nodatum ATCC 33099.;"
hypothetical protein
L3_058_144G1_scaffold_18_17
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14545..15504
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. CAG:782 RepID=R5JGH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDO57385.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L3_058_144G1_scaffold_18_18
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15553..15897)
DNA (345bp) protein (115aa)
Addiction module toxin, Txe/YoeB family n=2 Tax=Coprococcus RepID=C0B4N4_9FIRM
Addiction module toxin, Txe/YoeB family {ECO:0000313|EMBL:EEG91609.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
toxin-antitoxin system, toxin component, Txe/YoeB family
L3_058_144G1_scaffold_18_19
Dehalobacter sp. CF, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16023..18020)
DNA (1998bp) protein (666aa)
cell division protein FtsX n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI000365391A
ABC transporter permease protein
ABC transporter permease protein {ECO:0000313|EMBL:AFV06274.1}; TaxID=1131462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. CF.;"
L3_058_144G1_scaffold_18_20
Desulfosporosinus sp. HMP52, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18013..18780)
DNA (768bp) protein (256aa)
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7IYS6_DESMD
Bacteriocin ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGK86829.1}; TaxID=1487923 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. HMP52.;"
antimicrobial peptide ABC transporter ATPase
L3_058_144G1_scaffold_18_21
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18891..19688)
DNA (798bp) protein (266aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus youngiae DSM 17734.;"
Signal transduction histidine kinase n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5Y3F4_9FIRM
signal transduction histidine kinase
L3_058_144G1_scaffold_18_22
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19704..19886)
DNA (183bp) protein (61aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
Signal transduction histidine kinase n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WF79_DESOD
signal transduction histidine kinase
L3_058_144G1_scaffold_18_23
Dehalobacter sp. CF, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19888..20559)
DNA (672bp) protein (224aa)
Sensory transduction protein yxdJ n=3 Tax=Dehalobacter RepID=K4KVM0_9FIRM
Sensory transduction protein yxdJ
Sensory transduction protein yxdJ {ECO:0000313|EMBL:AFV06271.1}; TaxID=1131462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. CF.;"
L3_058_144G1_scaffold_18_24
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20575..21504)
DNA (930bp) protein (310aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
2-dehydropantoate 2-reductase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EMW5_9FIRM
2-dehydropantoate 2-reductase family protein
L3_058_144G1_scaffold_18_25
unknown

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comp(21629..22414)
DNA (786bp) protein (262aa)

This feature has no annotations

L3_058_144G1_scaffold_18_26
Clostridium sp. CAG:571, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22525..23352)
DNA (828bp) protein (276aa)
Predicted phosphohydrolases n=1 Tax=Clostridium sp. CAG:571 RepID=R5Y7J0_9CLOT
Predicted phosphohydrolases {ECO:0000313|EMBL:CDA17181.1}; TaxID=1262822 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:571.;"
Predicted phosphohydrolases
L3_058_144G1_scaffold_18_27
Peptostreptococcaceae bacterium OBRC8, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23349..24032)
DNA (684bp) protein (228aa)
DNA alkylation repair enzyme n=1 Tax=Eubacteriaceae bacterium OBRC8 RepID=J5WV95_9FIRM
DNA alkylation repair enzyme {ECO:0000313|EMBL:EJU24617.1}; TaxID=796941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium OBRC8.;"
DNA alkylation repair protein
L3_058_144G1_scaffold_18_28
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24041..26560)
DNA (2520bp) protein (840aa)
Sensor histidine kinase/response regulator n=1 Tax=Clostridium sp. D5 RepID=F0YZB8_9CLOT
Sensor histidine kinase/response regulator {ECO:0000313|EMBL:EGB92773.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
two-component system sensor histidine kinase
L3_058_144G1_scaffold_18_29
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26709..27029
DNA (321bp) protein (107aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VLY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX77396.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
transcriptional regulator PadR family
L3_058_144G1_scaffold_18_30
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

27022..27618
DNA (597bp) protein (199aa)
Conserved domain protein n=2 Tax=Eggerthella RepID=F0HPK9_9ACTN
Conserved domain protein {ECO:0000313|EMBL:EGC88835.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
hypothetical protein
Displaying items 1-30 of 297 in total

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