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L3_058_144G1_scaffold_82

Search features with annotation key words

Displaying items 1-30 of 140 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_144G1_scaffold_82_1
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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170..1666
DNA (1497bp) protein (499aa)
Transcriptional regulator, GntR family n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3A9M3_9CLOT
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EFD01498.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
transcriptional regulator
L3_058_144G1_scaffold_82_2
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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1635..2405
DNA (771bp) protein (257aa)
Protein tyrosine/serine phosphatase (EC:3.1.3.48)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IFG7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI59750.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
L3_058_144G1_scaffold_82_3
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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2746..3129
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EP33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02358.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
preprotein translocase, YajC subunit
L3_058_144G1_scaffold_82_4
[Eubacterium] sulci, Clostridiales, Clostridia, Firmicutes, Bacteria

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3309..5576
DNA (2268bp) protein (756aa)
Putative uncharacterized protein n=1 Tax=Eubacterium infirmum F0142 RepID=H1PLP6_9FIRM
Export membrane protein SecF {ECO:0000313|EMBL:EUC78332.1}; TaxID=888727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium sulci ATCC 35585.;"
protein-export membrane protein SecDF
L3_058_144G1_scaffold_82_5
[Eubacterium] sulci, Clostridiales, Clostridia, Firmicutes, Bacteria

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5604..7805
DNA (2202bp) protein (734aa)
Putative uncharacterized protein n=1 Tax=Eubacterium infirmum F0142 RepID=H1PLP5_9FIRM
Putative GTP diphosphokinase {ECO:0000313|EMBL:EUC78330.1}; TaxID=888727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium sulci ATCC 35585.;"
GTP pyrophosphokinase
L3_058_144G1_scaffold_82_6
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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7851..8468
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F0G6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02501.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hydrolase
L3_058_144G1_scaffold_82_7
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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8461..9822
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6EHI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA89492.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
coproporphyrinogen dehydrogenase HemZ
L3_058_144G1_scaffold_82_8
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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9825..11078
DNA (1254bp) protein (418aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZG3_9FIRM
L3_058_144G1_scaffold_82_9
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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11180..12943
DNA (1764bp) protein (588aa)
Aspartate--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EPL6_9FIRM
Aspartate--tRNA ligase {ECO:0000313|EMBL:CDB02498.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
aspartyl-tRNA synthetase
L3_058_144G1_scaffold_82_10
[Eubacterium] nodatum, Clostridiales, Clostridia, Firmicutes, Bacteria

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12946..13548
DNA (603bp) protein (201aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=1161902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium nodatum ATCC 33099.;"
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:3.5.4.4)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DZ06_9FIRM
L3_058_144G1_scaffold_82_11
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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13526..14092
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6EHL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA89497.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
putative HD superfamily hydrolase of NAD metabolism
L3_058_144G1_scaffold_82_12
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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14430..14771
DNA (342bp) protein (114aa)
Ribosomal silencing factor RsfS n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DLX5_9FIRM
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
iojap-related protein
L3_058_144G1_scaffold_82_13
[Eubacterium] nodatum, Clostridiales, Clostridia, Firmicutes, Bacteria

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14781..17249
DNA (2469bp) protein (823aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1161902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium nodatum ATCC 33099.;"
Leucine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZD0_9FIRM
leucyl-tRNA synthetase
L3_058_144G1_scaffold_82_14
[Eubacterium] infirmum, Clostridiales, Clostridia, Firmicutes, Bacteria

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17260..19053
DNA (1794bp) protein (598aa)
rnjA; ribonuclease J 1 (EC:3.1.-.-)
Putative uncharacterized protein n=1 Tax=Eubacterium infirmum F0142 RepID=H1PLN6_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EHO84719.1}; TaxID=883109 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium infirmum F0142.;"
L3_058_144G1_scaffold_82_15
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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19224..19562
DNA (339bp) protein (113aa)
PF06133 family protein n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6EHL7_9FIRM
PF06133 family protein {ECO:0000313|EMBL:CDA89502.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
protein of unknown function DUF964
L3_058_144G1_scaffold_82_16
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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19742..20302
DNA (561bp) protein (187aa)
Elongation factor P n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ERD6_9FIRM
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
elongation factor P
L3_058_144G1_scaffold_82_17
Mogibacterium timidum, Mogibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20424..21473
DNA (1050bp) protein (350aa)
YceG family protein n=1 Tax=Mogibacterium sp. CM50 RepID=J6H8B1_9FIRM
YceG family protein {ECO:0000313|EMBL:EUC51758.1}; TaxID=1401079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis; Mogibacterium.;" source="Mogibacterium timidum ATCC 33093.;"
aminodeoxychorismate lyase
L3_058_144G1_scaffold_82_18
[Eubacterium] nodatum, Clostridiales, Clostridia, Firmicutes, Bacteria

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21474..22130
DNA (657bp) protein (219aa)
Putative uncharacterized protein n=1 Tax=Eubacterium infirmum F0142 RepID=H1PLN3_9FIRM
O-methyltransferase {ECO:0000313|EMBL:ETK00131.1}; TaxID=1161902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium nodatum ATCC 33099.;"
O-methyltransferase
L3_058_144G1_scaffold_82_19
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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22132..23379
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FKA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02487.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
collagenase-like protease
L3_058_144G1_scaffold_82_20
[Eubacterium] infirmum, Clostridiales, Clostridia, Firmicutes, Bacteria

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23379..24671
DNA (1293bp) protein (431aa)
Putative uncharacterized protein n=1 Tax=Eubacterium infirmum F0142 RepID=H1PLN1_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EHO84714.1}; TaxID=883109 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium infirmum F0142.;"
CBS/transporter associated domain-containing protein
L3_058_144G1_scaffold_82_21
unknown

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24668..25102
DNA (435bp) protein (145aa)

This feature has no annotations

L3_058_144G1_scaffold_82_22
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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25089..27650
DNA (2562bp) protein (854aa)
Putative translation elongation factor G n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FNA9_9CLOT
Putative translation elongation factor G {ECO:0000313|EMBL:EEA82477.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
small GTP-binding protein domain
L3_058_144G1_scaffold_82_23
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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27652..28536
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G8J2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW05704.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
bifunctional ABC transporter protein/LytT family transcriptional regulator
L3_058_144G1_scaffold_82_24
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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28650..29477
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G8J3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW05705.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
ABC transporter ATP-binding protein
L3_058_144G1_scaffold_82_25
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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29479..30210
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G8J4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW05706.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
ABC transporter permease
L3_058_144G1_scaffold_82_26
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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30333..30626
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DZF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA89686.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
phosphoesterase
L3_058_144G1_scaffold_82_27
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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30644..31393
DNA (750bp) protein (250aa)
Putative ferredoxin n=1 Tax=Clostridium sp. D5 RepID=F0YVR3_9CLOT
Putative ferredoxin {ECO:0000313|EMBL:EGB94981.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
putative polyferredoxin
L3_058_144G1_scaffold_82_28
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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31478..32401
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Allobaculum stercoricanis RepID=UPI0003685F32
Uncharacterized protein {ECO:0000313|EMBL:CDA19504.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
hypothetical protein
L3_058_144G1_scaffold_82_29
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(32414..33604)
DNA (1191bp) protein (397aa)
Peptidase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G7D6_9FIRM
Peptidase {ECO:0000313|EMBL:EFW06011.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
peptidase S8/S53 subtilisin kexin sedolisin
L3_058_144G1_scaffold_82_30
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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33767..34342
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KW06_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN33386.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
TetR family transcriptional regulator
Displaying items 1-30 of 140 in total

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