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L3_058_144G1_scaffold_501

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_144G1_scaffold_501_1
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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271..636
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C4H0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG72963.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
hypothetical protein
L3_058_144G1_scaffold_501_2
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

656..1033
DNA (378bp) protein (126aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NDK9_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS07438.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L3_058_144G1_scaffold_501_3
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

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1043..1306
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CAE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS72418.1}; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
hypothetical protein
L3_058_144G1_scaffold_501_4
[Eubacterium] nodatum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1581..4121
DNA (2541bp) protein (847aa)
Putative calcium-translocating P-type ATPase, PMCA-type n=1 Tax=Eubacterium brachy ATCC 33089 RepID=V1CQH1_9FIRM
Putative calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:ETJ99290.1}; TaxID=1161902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium nodatum ATCC 33099.;"
ATPase, P-type (transporting), HAD superfamily, subfamily IC
L3_058_144G1_scaffold_501_5
Anaerostipes sp. 3_2_56FAA, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4214..4792)
DNA (579bp) protein (193aa)
Uncharacterized protein n=2 Tax=Anaerostipes RepID=R6RHE8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV23468.1}; TaxID=665937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes sp. 3_2_56FAA.;"
hypothetical protein
L3_058_144G1_scaffold_501_6
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(4842..6293)
DNA (1452bp) protein (484aa)
Amino acid transporter n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F2Y5_9FIRM
Amino acid transporter {ECO:0000313|EMBL:CDB03779.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
amino acid transporter
L3_058_144G1_scaffold_501_7
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(6477..7793)
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ETL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB03275.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
putative drug/sodium antiporter, MATE family
L3_058_144G1_scaffold_501_8
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

8049..8891
DNA (843bp) protein (281aa)
Regulatory protein MerR n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F1H9_9FIRM
Regulatory protein MerR {ECO:0000313|EMBL:CDB03274.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
MerR family transcriptional regulator
L3_058_144G1_scaffold_501_9
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8866..9531
DNA (666bp) protein (222aa)
DNA-binding response regulator n=1 Tax=Blautia hydrogenotrophica CAG:147 RepID=R5C3P4_9FIRM
DNA-binding response regulator {ECO:0000313|EMBL:CCX59467.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
hypothetical protein
L3_058_144G1_scaffold_501_10
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9624..10538
DNA (915bp) protein (305aa)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CSL6_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG47243.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
hypothetical protein
L3_058_144G1_scaffold_501_11
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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10531..11373
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00037F30F8
Uncharacterized protein {ECO:0000313|EMBL:EEF65892.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_058_144G1_scaffold_501_12
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11457..12341
DNA (885bp) protein (295aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=272564 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (strain DCB-2 / DSM 10664).;"
Histidine kinase n=1 Tax=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) RepID=B8FSH2_DESHD
histidine kinase
L3_058_144G1_scaffold_501_13
Paenibacillus lactis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(12347..12988)
DNA (642bp) protein (214aa)
Putative uncharacterized protein n=1 Tax=Paenibacillus lactis 154 RepID=G4H8M7_9BACL
Putative uncharacterized protein {ECO:0000313|EMBL:EHB68212.1}; Flags: Precursor;; TaxID=743719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus lactis 154.;"
hypothetical protein
L3_058_144G1_scaffold_501_14
Paenibacillus sp. Y412MC10, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(12975..13256)
DNA (282bp) protein (94aa)
Transcriptional regulator, ArsR family n=1 Tax=Geobacillus sp. (strain Y412MC10) RepID=D3EBD5_GEOS4
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ACX66981.1}; TaxID=481743 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Geobacillus sp. (strain Y412MC10).;"
L3_058_144G1_scaffold_501_15
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(13380..14246)
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI000378A80E
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:CDA62639.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
FMN-binding domain./Fibronectin type III domain./Iron Transport-associated domain.
L3_058_144G1_scaffold_501_16
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14337..15266)
DNA (930bp) protein (310aa)
Pyruvate synthase subunit porB n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0AX73_SYNWW
pyruvate synthase subunit porB
Tax=BJP_IG2069_Clostridiales_48_15
L3_058_144G1_scaffold_501_17
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15263..16456)
DNA (1194bp) protein (398aa)
Pyruvate ferredoxin oxidoreductase, alpha subunit n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0AX72_SYNWW
pyruvate synthase subunit porA
Pyruvate synthase subunit porA {ECO:0000313|EMBL:AKA69235.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
L3_058_144G1_scaffold_501_18
Desulfosporosinus sp. Tol-M, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16458..16760)
DNA (303bp) protein (101aa)
Pyruvate ferredoxin oxidoreductase, delta subunit n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0AX71_SYNWW
Ferredoxin {ECO:0000313|EMBL:KGP76589.1}; TaxID=1536651 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. Tol-M.;"
pyruvate synthase subunit porD
L3_058_144G1_scaffold_501_19
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16773..17360)
DNA (588bp) protein (196aa)
porC; pyruvate synthase subunit PorC (EC:1.2.7.1)
Pyruvate synthase subunit PorC {ECO:0000313|EMBL:BAK97683.1}; EC=1.2.7.1 {ECO:0000313|EMBL:BAK97683.1};; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
Pyruvate synthase subunit PorC n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KT31_OSCVS
L3_058_144G1_scaffold_501_20
Bacteroides fragilis CAG:558, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(17933..20926)
DNA (2994bp) protein (998aa)
LamG domain protein jellyroll fold domain protein n=1 Tax=Bacteroides fragilis CAG:558 RepID=R5RGU7_9BACE
LamG domain protein jellyroll fold domain protein {ECO:0000313|EMBL:CCZ37944.1}; TaxID=1263047 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:558.;"
L3_058_144G1_scaffold_501_21
Bacteroides fragilis CAG:558, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20895..22577)
DNA (1683bp) protein (561aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis CAG:558 RepID=R5R9Q6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ37945.1}; TaxID=1263047 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:558.;"
Protein of unknown function (DUF1557)
L3_058_144G1_scaffold_501_22
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22765..23325
DNA (561bp) protein (187aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YX22_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93510.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L3_058_144G1_scaffold_501_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23346..23801
DNA (456bp) protein (152aa)
Putative lipoprotein n=2 Tax=Clostridium difficile RepID=T4AUT4_CLODI
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:EQE65140.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_058_144G1_scaffold_501_24
Cryptobacterium sp. CAG:338, Cryptobacterium, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23902..24480)
DNA (579bp) protein (193aa)
Acyl carrier protein phosphodiesterase (EC:1.7.-.-)
Acyl carrier protein phosphodiesterase n=1 Tax=Cryptobacterium sp. CAG:338 RepID=R7CEZ5_9ACTN
Acyl carrier protein phosphodiesterase {ECO:0000313|EMBL:CDD76282.1}; TaxID=1262868 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Cryptobacterium; environmental samples.;" source="Cryptobacterium sp. CAG:338.;"
L3_058_144G1_scaffold_501_25
[Eubacterium] sulci, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24484..24945)
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=1 Tax=Eubacterium infirmum F0142 RepID=H1PKV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EUC78543.1}; TaxID=888727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium sulci ATCC 35585.;"
L3_058_144G1_scaffold_501_26
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24963..25181)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TFS6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ57916.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L3_058_144G1_scaffold_501_27
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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comp(25312..27117)
DNA (1806bp) protein (602aa)
ATPase components of ABC transporters with duplicated ATPase domains n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DPE6_9FIRM
ATPase components of ABC transporters with duplicated ATPase domains {ECO:0000313|EMBL:CDA90378.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
ATPase components of ABC transporters with duplicated ATPase domains
L3_058_144G1_scaffold_501_28
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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comp(27855..29237)
DNA (1383bp) protein (461aa)
Trimethylamine:corrinoid methyltransferase id=4243282 bin=GWF2_Lentisphaerae_49_21 species=unknown genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
trimethylamine:corrinoid methyltransferase
Tax=GWF2_Lentisphaerae_49_21_curated
L3_058_144G1_scaffold_501_29
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29228..29698)
DNA (471bp) protein (157aa)
Trimethylamine methyltransferase n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6ER72_9FIRM
trimethylamine methyltransferase
Tax=BJP_IG2103_Clostridiales_50_15
L3_058_144G1_scaffold_501_30
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29714..30682)
DNA (969bp) protein (323aa)
Trimethylamine methyltransferase MttB n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6E5B0_9FIRM
hypothetical protein
Tax=BJP_IG2103_Clostridiales_50_15
Displaying items 1-30 of 51 in total

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