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L3_058_144G1_scaffold_748

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_144G1_scaffold_748_1
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..483)
DNA (483bp) protein (161aa)
yjdI; putative Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YjdI (EC:4.2.-.-)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI000361B108
Tax=BJP_IG2103_Clostridiales_50_15
L3_058_144G1_scaffold_748_2
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(634..2655)
DNA (2022bp) protein (674aa)
Putative K(+)-stimulated pyrophosphate-energized sodium pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound sodium-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Putative K(+)-stimulated pyrophosphate-energized sodium pump n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ESF1_9FIRM
V-type H(+)-translocating pyrophosphatase
L3_058_144G1_scaffold_748_3
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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comp(2761..2991)
DNA (231bp) protein (77aa)
Preprotein translocase SecG subunit n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6E1D4_9FIRM
Preprotein translocase SecG subunit {ECO:0000313|EMBL:CDA90411.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
secG; preprotein translocase subunit SecG
L3_058_144G1_scaffold_748_4
[Eubacterium] nodatum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3266..4015)
DNA (750bp) protein (250aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1161902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium nodatum ATCC 33099.;"
tpiA; triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Eubacterium infirmum F0142 RepID=H1PLH2_9FIRM
L3_058_144G1_scaffold_748_5
[Eubacterium] nodatum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4153..5337)
DNA (1185bp) protein (395aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1161902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium nodatum ATCC 33099.;"
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6EKA7_9FIRM
L3_058_144G1_scaffold_748_6
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(5406..6425)
DNA (1020bp) protein (340aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
GPD1; Glyceraldehyde-3-phosphate dehydrogenase 1 (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase type I n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F0C4_9FIRM
L3_058_144G1_scaffold_748_7
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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comp(6541..7902)
DNA (1362bp) protein (454aa)
RNA polymerase sigma-54 factor n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DS52_9FIRM
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:CDA90405.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
RNA polymerase sigma 54 subunit RpoN
L3_058_144G1_scaffold_748_8
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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comp(7947..8417)
DNA (471bp) protein (157aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DPH4_9FIRM
tRNA/rRNA methyltransferase SpoU
L3_058_144G1_scaffold_748_9
[Eubacterium] nodatum, Clostridiales, Clostridia, Firmicutes, Bacteria

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8540..9505
DNA (966bp) protein (322aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1161902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium nodatum ATCC 33099.;"
Homoserine dehydrogenase n=1 Tax=Eubacterium infirmum F0142 RepID=H1PLG6_9FIRM
hypothetical protein
L3_058_144G1_scaffold_748_10
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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9522..10022
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6E1C1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA90401.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
hypothetical protein
L3_058_144G1_scaffold_748_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10099..11757)
DNA (1659bp) protein (553aa)
BlaR1 peptidase M56 family protein n=1 Tax=Clostridium difficile CD160 RepID=T3DKE0_CLODI
BlaR1 peptidase M56 family protein {ECO:0000313|EMBL:EQF27020.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
peptidase M56 BlaR1
L3_058_144G1_scaffold_748_12
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11754..12134)
DNA (381bp) protein (127aa)
Transcriptional regulator, BlaI/MecI/CopY family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EGZ0_9FIRM
Transcriptional regulator, BlaI/MecI/CopY family {ECO:0000313|EMBL:EEQ57475.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
transcriptional regulator
L3_058_144G1_scaffold_748_13
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12375..13190)
DNA (816bp) protein (272aa)
Fibronectin type III domain protein n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5VZU1_9FIRM
Fibronectin type III domain protein {ECO:0000313|EMBL:CCZ93344.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
cell wall-binding protein
L3_058_144G1_scaffold_748_14
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(13251..13910)
DNA (660bp) protein (220aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Endonuclease III n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FLD8_9FIRM
endonuclease III
L3_058_144G1_scaffold_748_15
[Eubacterium] nodatum, Clostridiales, Clostridia, Firmicutes, Bacteria

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14016..14678
DNA (663bp) protein (221aa)
FCD domain protein n=1 Tax=Mogibacterium sp. CM50 RepID=J6H1P9_9FIRM
FCD domain protein {ECO:0000313|EMBL:ETK00127.1}; TaxID=1161902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium nodatum ATCC 33099.;"
hypothetical protein
L3_058_144G1_scaffold_748_16
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(14773..17364)
DNA (2592bp) protein (864aa)
Chaperone ClpB n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EQM1_9FIRM
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
ATP-dependent chaperone ClpB
L3_058_144G1_scaffold_748_17
[Eubacterium] nodatum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17665..18381)
DNA (717bp) protein (239aa)
Peptidase, M50 family {ECO:0000313|EMBL:ETJ99230.1}; EC=3.4.24.- {ECO:0000313|EMBL:ETJ99230.1};; TaxID=1161902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium nodatum ATCC 33099.;"
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ESL6_9FIRM
peptidase M50
L3_058_144G1_scaffold_748_18
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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18497..18853
DNA (357bp) protein (119aa)
Peptidoglycan-binding LysM n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F1J6_9FIRM
Peptidoglycan-binding LysM {ECO:0000313|EMBL:CDB02901.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
peptidoglycan-binding LysM
L3_058_144G1_scaffold_748_19
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19181..19948)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GNK0_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO37185.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_058_144G1_scaffold_748_20
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19949..21301)
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GNJ9_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO37184.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_058_144G1_scaffold_748_21
Clostridiales bacterium S5-A14a, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21523..22986)
DNA (1464bp) protein (488aa)
Cardiolipin synthase {ECO:0000256|HAMAP-Rule:MF_01916}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01916};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01916};; TaxID=1230734 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Clostridiales bacterium S5-A14a.;"
Cardiolipin synthase n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6EQR3_9FIRM
cardiolipin synthase
L3_058_144G1_scaffold_748_22
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23181..24086
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZI28_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ13678.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
hypothetical protein
L3_058_144G1_scaffold_748_23
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(24145..25626)
DNA (1482bp) protein (494aa)
Sporulation stage IV protein A n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F1K2_9FIRM
Sporulation stage IV protein A {ECO:0000313|EMBL:CDB02906.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
sporulation stage IV, protein A
L3_058_144G1_scaffold_748_24
[Eubacterium] nodatum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25692..26318)
DNA (627bp) protein (209aa)
Precorrin-8X methylmutase {ECO:0000313|EMBL:ETK00515.1}; EC=5.4.1.2 {ECO:0000313|EMBL:ETK00515.1};; TaxID=1161902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium nodatum ATCC 33099.;"
precorrin-8X methylmutase (EC:5.4.1.2)
Precorrin isomerase n=1 Tax=Roseburia sp. CAG:471 RepID=R7EGG6_9FIRM
L3_058_144G1_scaffold_748_25
Clostridiales bacterium S5-A14a, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26318..26983)
DNA (666bp) protein (222aa)
Cob(I)yrinic acid a c-diamide adenosyltransferase n=1 Tax=Roseburia sp. CAG:471 RepID=R7E7V8_9FIRM
Cob(I)yrinic acid a c-diamide adenosyltransferase {ECO:0000313|EMBL:KGF08921.1}; TaxID=1230734 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Clostridiales bacterium S5-A14a.;"
ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
L3_058_144G1_scaffold_748_26
[Eubacterium] nodatum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27136..28590)
DNA (1455bp) protein (485aa)
adenosylcobyric acid synthase (EC:6.3.5.10)
Cobyric acid synthase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YRU1_CLOBU
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=1161902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium nodatum ATCC 33099.;"
L3_058_144G1_scaffold_748_27
[Eubacterium] nodatum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28583..29653)
DNA (1071bp) protein (357aa)
Aminotransferase class I and II n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1T8X4_9CLOT
Putative histidinol-phosphate transaminase {ECO:0000313|EMBL:ETJ98867.1}; TaxID=1161902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium nodatum ATCC 33099.;"
class I and II aminotransferase
L3_058_144G1_scaffold_748_28
[Eubacterium] nodatum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29650..30615)
DNA (966bp) protein (322aa)
Cobalamin biosynthesis protein CobD n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1T8X3_9CLOT
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1161902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium nodatum ATCC 33099.;"
cobalamin biosynthesis protein CobD
L3_058_144G1_scaffold_748_29
Clostridiales bacterium S5-A14a, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30606..31976)
DNA (1371bp) protein (457aa)
Cobyrinic acid A,C-diamide synthase n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I0R4_CLOCE
Uncharacterized protein {ECO:0000313|EMBL:KGF08917.1}; TaxID=1230734 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Clostridiales bacterium S5-A14a.;"
cobyrinic acid a,c-diamide synthase
L3_058_144G1_scaffold_748_30
Clostridiales bacterium S5-A14a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31966..33168)
DNA (1203bp) protein (401aa)
Precorrin-6y c5,15-methyltransferase n=1 Tax=Clostridium termitidis CT1112 RepID=S0FV87_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF08916.1}; TaxID=1230734 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Clostridiales bacterium S5-A14a.;"
precorrin-6y C5,15-methyltransferase subunit CbiE/precorrin-6Y C5,15-methyltransferase subunit CbiT
Displaying items 1-30 of 33 in total

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