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L3_058_256G1_scaffold_812

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Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_256G1_scaffold_812_1
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(1..405)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RL66_9FIRM
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
electron transport complex, RnfABCDGE type, E subunit
L3_058_256G1_scaffold_812_2
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(407..1015)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R7C2_9FIRM
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Predicted NADH:ubiquinone oxidoreductase, subunit RnfG
L3_058_256G1_scaffold_812_3
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(1012..1971)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6REQ1_9FIRM
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
electron transport complex, RnfABCDGE type, D subunit
L3_058_256G1_scaffold_812_4
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(1984..3306)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R4D9_9FIRM
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
rnfC/nqrF
L3_058_256G1_scaffold_812_5
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

3429..4601
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SAZ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43797.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L3_058_256G1_scaffold_812_6
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(4623..5705)
DNA (1083bp) protein (361aa)
S1 RNA binding domain protein n=3 Tax=Lachnospiraceae RepID=C9L674_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:EGG82809.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
Ribosomal protein S1
L3_058_256G1_scaffold_812_7
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(5686..6537)
DNA (852bp) protein (284aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RL53_9FIRM
L3_058_256G1_scaffold_812_8
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(6539..7219)
DNA (681bp) protein (227aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R7B1_9FIRM
L3_058_256G1_scaffold_812_9
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(7239..8486)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6REP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43789.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
conserved hypothetical protein TIGR00275
L3_058_256G1_scaffold_812_10
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(8497..9429)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R4D3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43788.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
N-acetylmannosamine kinase
L3_058_256G1_scaffold_812_11
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(9642..11057)
DNA (1416bp) protein (472aa)
Pyruvate/oxaloacetate carboxyltransferase (EC:4.1.1.3)
Oxaloacetate decarboxylase alpha subunit n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SAY9_9FIRM
Oxaloacetate decarboxylase alpha subunit {ECO:0000313|EMBL:CDC43787.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_058_256G1_scaffold_812_12
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(11094..12242)
DNA (1149bp) protein (383aa)
sodium ion-translocating decarboxylase, beta subunit (EC:4.1.1.3 4.1.1.70)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6REN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43784.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_058_256G1_scaffold_812_13
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(12313..12678)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SAY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43782.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Acetyl/propionyl-CoA carboxylase, alpha subunit
L3_058_256G1_scaffold_812_14
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(12703..13464)
DNA (762bp) protein (254aa)
Oxaloacetate decarboxylase gamma chain {ECO:0000256|RuleBase:RU004278}; EC=4.1.1.3 {ECO:0000256|RuleBase:RU004278};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Oxaloacetate decarboxylase gamma chain n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R799_9FIRM
sodium pump decarboxylases, gamma subunit
L3_058_256G1_scaffold_812_15
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(13481..14917)
DNA (1437bp) protein (479aa)
Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) (EC:6.4.1.3)
Methylmalonyl-CoA decarboxylase alpha subunit n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R4C6_9FIRM
Methylmalonyl-CoA decarboxylase alpha subunit {ECO:0000313|EMBL:CDC43778.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_058_256G1_scaffold_812_16
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(15105..15731)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R4C2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43773.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_058_256G1_scaffold_812_17
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

16024..16566
DNA (543bp) protein (181aa)
Carbonate dehydratase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R788_9FIRM
Carbonate dehydratase {ECO:0000313|EMBL:CDC43770.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
carbonic anhydrase
L3_058_256G1_scaffold_812_18
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(16635..17858)
DNA (1224bp) protein (408aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SAX0_9FIRM
L3_058_256G1_scaffold_812_19
unknown

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18324..18473
DNA (150bp) protein (50aa)

This feature has no annotations

L3_058_256G1_scaffold_812_20
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(18462..20096)
DNA (1635bp) protein (545aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R784_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43765.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
aminoglycoside phosphotransferase
L3_058_256G1_scaffold_812_21
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20093..21553)
DNA (1461bp) protein (487aa)
Cell envelope-like function transcriptional attenuator common domain protein n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LAV6_BLAHA
Cell envelope-like function transcriptional attenuator common domain protein {ECO:0000313|EMBL:EEX20774.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
cell envelope-related function transcriptional attenuator common domain
L3_058_256G1_scaffold_812_22
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21651..23168)
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=R0BDN5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ53444.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
L3_058_256G1_scaffold_812_23
unknown

Not on your lists

comp(23301..23873)
DNA (573bp) protein (191aa)

This feature has no annotations

L3_058_256G1_scaffold_812_24
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(23928..24203)
DNA (276bp) protein (92aa)
Conserved domain protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R780_9FIRM
Conserved domain protein {ECO:0000313|EMBL:CDC43760.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_058_256G1_scaffold_812_25
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24424..25092)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Lachnobacterium bovis RepID=UPI0003B44207
Uncharacterized protein {ECO:0000313|EMBL:EEQ58454.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L3_058_256G1_scaffold_812_26
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25085..26350)
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Lachnobacterium bovis RepID=UPI0003B74EF5
Uncharacterized protein {ECO:0000313|EMBL:EOS30587.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
hypothetical protein
Displaying 26 items

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