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L3_060_000G1_scaffold_2108

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Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_000G1_scaffold_2108_1
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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329..1207
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W5J0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38407.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
putative xylanase/chitin deacetylase
L3_060_000G1_scaffold_2108_2
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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1233..1523
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SHA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46086.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_060_000G1_scaffold_2108_3
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1738..2463
DNA (726bp) protein (242aa)
30S ribosomal protein S2 n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W0C1_9CLOT
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
rpsB; 30S ribosomal protein S2
L3_060_000G1_scaffold_2108_4
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2626..3558
DNA (933bp) protein (311aa)
Elongation factor Ts n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W136_9CLOT
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
translation elongation factor Ts (EF-Ts)
L3_060_000G1_scaffold_2108_5
unknown

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3785..4384
DNA (600bp) protein (200aa)

This feature has no annotations

L3_060_000G1_scaffold_2108_6
Gemella bergeri, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

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4476..5270
DNA (795bp) protein (265aa)
Cof-like hydrolase n=1 Tax=Gemella bergeriae ATCC 700627 RepID=U2QC94_9BACL
Cof-like hydrolase {ECO:0000313|EMBL:ERK60450.1}; TaxID=1321820 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella bergeriae ATCC 700627.;"
HAD-superfamily hydrolase, subfamily IIB
L3_060_000G1_scaffold_2108_7
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5273..6118)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B8Z5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG84845.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
Predicted transcriptional regulators
L3_060_000G1_scaffold_2108_8
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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6320..6898
DNA (579bp) protein (193aa)
DNA-binding helix-turn-helix protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NZN1_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDM98880.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_060_000G1_scaffold_2108_9
unknown

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7004..7120
DNA (117bp) protein (39aa)

This feature has no annotations

L3_060_000G1_scaffold_2108_10
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7290..8135
DNA (846bp) protein (282aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VWY4_9CLOT
putative methyltransferase
L3_060_000G1_scaffold_2108_11
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8181..8618)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VSF1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35399.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L3_060_000G1_scaffold_2108_12
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8608..8913)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VRK9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35400.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
nucleotidyltransferase domain-containing protein
L3_060_000G1_scaffold_2108_13
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8930..9658)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VT36_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35401.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L3_060_000G1_scaffold_2108_14
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9673..10938)
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VWW2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35402.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
cwp19; Cell surface protein cwp19
L3_060_000G1_scaffold_2108_15
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11092..11964
DNA (873bp) protein (291aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VSB2_9CLOT
hypothetical protein
L3_060_000G1_scaffold_2108_16
unknown

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comp(12039..12131)
DNA (93bp) protein (31aa)

This feature has no annotations

L3_060_000G1_scaffold_2108_17
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12373..14718)
DNA (2346bp) protein (782aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VSG7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35414.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
clpE; ATP-dependent Clp protease ATP-binding subunit ClpE
L3_060_000G1_scaffold_2108_18
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14744..15367)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VSC4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35413.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L3_060_000G1_scaffold_2108_19
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15371..16603)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VWX2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35412.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L3_060_000G1_scaffold_2108_20
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16675..17487)
DNA (813bp) protein (271aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
truA; tRNA pseudouridine synthase TruA (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VT46_9CLOT
L3_060_000G1_scaffold_2108_21
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17613..18416)
DNA (804bp) protein (268aa)
Energy-coupling factor transporter transmembrane protein EcfT n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VRL9_9CLOT
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000256|HAMAP-Rule:MF_01461}; Short=ECF transporter T component EcfT {ECO:0000256|HAMAP-Rule:MF_01461};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
putative cobalt ABC transporter permease protein
L3_060_000G1_scaffold_2108_22
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18410..19276)
DNA (867bp) protein (289aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Cobalt ABC transporter, ATP-binding protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VSG1_9CLOT
putative cobalt ABC transporter ATP-binding protein
L3_060_000G1_scaffold_2108_23
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19324..20169)
DNA (846bp) protein (282aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
ecfA2; Energy-coupling factor transporter ATP-binding protein EcfA 2 (EC:3.6.3.-)
Cobalt ABC transporter, ATP-binding protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VSB9_9CLOT
L3_060_000G1_scaffold_2108_24
unknown

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comp(20139..20291)
DNA (153bp) protein (51aa)

This feature has no annotations

L3_060_000G1_scaffold_2108_25
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20297..21160)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VWW6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35407.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
putative SAM-dependent methyltransferase
L3_060_000G1_scaffold_2108_26
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21460..23391
DNA (1932bp) protein (644aa)
UPF0313 protein HMPREF1526_02867 n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VRL4_9CLOT
UPF0313 protein HMPREF1526_02867 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
UPF0313 protein
Displaying 26 items

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