ggKbase home page

L3_060_043G1_scaffold_9

Search features with annotation key words

Displaying items 1-30 of 237 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_043G1_scaffold_9_1
unknown

Not on your lists

72..218
DNA (147bp) protein (49aa)

This feature has no annotations

L3_060_043G1_scaffold_9_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1413..1850
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Clostridium difficile Y401 RepID=T4H918_CLODI
Phage-associated protein-like protein {ECO:0000313|EMBL:EIA17134.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
protein of unknown function DUF4065
L3_060_043G1_scaffold_9_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1850..2779
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Clostridium difficile CD22 RepID=T2V799_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EDT15032.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_060_043G1_scaffold_9_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3802..5412
DNA (1611bp) protein (537aa)
subtilase (EC:3.4.21.-)
Subtilase family protein {ECO:0000313|EMBL:EDT25231.1}; EC=3.4.21.- {ECO:0000313|EMBL:EDT25231.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
CspA family protein n=2 Tax=Clostridium perfringens RepID=Q0TNJ8_CLOP1
L3_060_043G1_scaffold_9_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5414..7168
DNA (1755bp) protein (585aa)
subtilase (EC:3.4.21.-)
Subtilase family protein {ECO:0000313|EMBL:EDT25311.1}; EC=3.4.21.- {ECO:0000313|EMBL:EDT25311.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
CspC family protein n=2 Tax=Clostridium perfringens RepID=Q0TNJ9_CLOP1
L3_060_043G1_scaffold_9_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7293..8714)
DNA (1422bp) protein (474aa)
Major facilitator family transporter n=6 Tax=Clostridium perfringens RepID=Q0TNK0_CLOP1
major facilitator family transporter
Major facilitator family transporter {ECO:0000313|EMBL:EDT15326.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_060_043G1_scaffold_9_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9003..9452
DNA (450bp) protein (150aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=H7CYD5_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16313.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_060_043G1_scaffold_9_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9653..10699
DNA (1047bp) protein (349aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CT91_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT27729.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L3_060_043G1_scaffold_9_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10712..13954
DNA (3243bp) protein (1081aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CT90_CLOPF
Lipoprotein, putative {ECO:0000313|EMBL:EDT27805.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L3_060_043G1_scaffold_9_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14125..15156
DNA (1032bp) protein (344aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CT89_CLOPF
apbE; thiamine biosynthesis lipoprotein
Probable thiamine biosynthesis lipoprotein {ECO:0000313|EMBL:BAB81812.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_060_043G1_scaffold_9_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15157..15531
DNA (375bp) protein (125aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=B1BSL3_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT73274.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_060_043G1_scaffold_9_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15549..16064
DNA (516bp) protein (172aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=Q8XIL5_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81810.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_060_043G1_scaffold_9_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16468..17328)
DNA (861bp) protein (287aa)
Ribosomal protein L11 methyltransferase n=1 Tax=Clostridium perfringens F262 RepID=H7CYC9_CLOPF
Ribosomal protein L11 methyltransferase {ECO:0000313|EMBL:EIA16307.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
50S ribosomal protein L11 methyltransferase
L3_060_043G1_scaffold_9_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17588..19345
DNA (1758bp) protein (586aa)
Helicase domain protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RLP2_CLOPF
helicase
Helicase domain-containing protein {ECO:0000313|EMBL:EIA16306.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_060_043G1_scaffold_9_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19357..19647
DNA (291bp) protein (97aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CYC7_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT27814.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_060_043G1_scaffold_9_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19780..20175
DNA (396bp) protein (132aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=H7CYC6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81806.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_060_043G1_scaffold_9_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20378..21076
DNA (699bp) protein (233aa)
DNA-binding response regulator n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R3I2_CLOPF
DNA-binding response regulator {ECO:0000313|EMBL:EDT25252.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
virI; DNA-binding response regulator
L3_060_043G1_scaffold_9_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21066..22514
DNA (1449bp) protein (483aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Sensor histidine kinase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R3I1_CLOPF
virJ; sensor histidine kinase
L3_060_043G1_scaffold_9_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22631..23887
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RLN7_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT27696.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L3_060_043G1_scaffold_9_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23906..24727
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R3H9_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT25275.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
L3_060_043G1_scaffold_9_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25236..25652
DNA (417bp) protein (139aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CYC1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15293.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_060_043G1_scaffold_9_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25787..26566)
DNA (780bp) protein (260aa)
Iron-sulfur cluster-binding protein n=5 Tax=Clostridium perfringens RepID=H7CYC0_CLOPF
(Fe-S)-binding protein
Iron-sulfur cluster-binding protein {ECO:0000313|EMBL:EIA16298.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_060_043G1_scaffold_9_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26739..28247
DNA (1509bp) protein (503aa)
His/Glu/Gln/Arg/opine amino acid ABC transporter amino acid-binding protein/permease n=8 Tax=Clostridium perfringens RepID=H7CYB9_CLOPF
His/Glu/Gln/Arg/opine amino acid ABC transporter amino acid-binding protein/permease
Amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:EDT73265.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_060_043G1_scaffold_9_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28266..29003
DNA (738bp) protein (246aa)
Amino acid ABC transporter, ATP-binding protein n=2 Tax=Clostridium perfringens RepID=B1R3H5_CLOPF
Amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT27698.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
amino acid ABC transporter
L3_060_043G1_scaffold_9_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29050..29355)
DNA (306bp) protein (102aa)
PadR family transcriptional regulator n=11 Tax=Clostridium perfringens RepID=H7CYB7_CLOPF
PadR family transcriptional regulator
PadR family transcriptional regulator {ECO:0000313|EMBL:EIA16295.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_060_043G1_scaffold_9_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29719..31056)
DNA (1338bp) protein (446aa)
FemAB family protein n=5 Tax=Clostridium perfringens RepID=H7CYB6_CLOPF
FemAB family protein
FemAB family protein {ECO:0000313|EMBL:EIA16294.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_060_043G1_scaffold_9_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31323..32000)
DNA (678bp) protein (226aa)
Putative membrane protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R3H2_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDT25349.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
L3_060_043G1_scaffold_9_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32222..33958
DNA (1737bp) protein (579aa)
Sensor histidine kinase n=7 Tax=Clostridium perfringens RepID=H7CYB4_CLOPF
sensor histidine kinase
Sensor histidine kinase {ECO:0000313|EMBL:EIA16292.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_060_043G1_scaffold_9_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33963..35486
DNA (1524bp) protein (508aa)
DNA-binding response regulator, AraC family n=8 Tax=Clostridium perfringens RepID=Q0TNM3_CLOP1
AraC family transcriptional regulator
DNA-binding response regulator, AraC family {ECO:0000313|EMBL:EDT15254.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_060_043G1_scaffold_9_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35826..36317
DNA (492bp) protein (164aa)
Molybdenum cofactor synthesis protein n=4 Tax=Clostridium perfringens RepID=H7CYB2_CLOPF
Molybdenum cofactor synthesis protein {ECO:0000313|EMBL:EDT25263.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
molybdenum cofactor synthesis protein
Displaying items 1-30 of 237 in total

View Taxonomy