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L3_060_043G1_scaffold_38

Search features with annotation key words

Displaying items 1-30 of 120 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_043G1_scaffold_38_1
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(160..1653)
DNA (1494bp) protein (498aa)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SNE2_9FIRM
Inosine-5'-monophosphate dehydrogenase {ECO:0000313|EMBL:CDC48107.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
inosine 5-monophosphate dehydrogenase
L3_060_043G1_scaffold_38_2
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1764..2543)
DNA (780bp) protein (260aa)
Phosphonoacetaldehyde hydrolase {ECO:0000256|HAMAP-Rule:MF_01375}; Short=Phosphonatase {ECO:0000256|HAMAP-Rule:MF_01375};; EC=3.11.1.1 {ECO:0000256|HAMAP-Rule:MF_01375};; Phosphonoacetaldehyde phosphonohydrolase {ECO:0000256|HAMAP-Rule:MF_01375}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Phosphonoacetaldehyde hydrolase n=3 Tax=Clostridiales RepID=F7JY52_9FIRM
hypothetical protein
L3_060_043G1_scaffold_38_3
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2545..3636)
DNA (1092bp) protein (364aa)
2-aminoethylphosphonate--pyruvate transaminase {ECO:0000256|HAMAP-Rule:MF_01376, ECO:0000256|SAAS:SAAS00009569}; EC=2.6.1.37 {ECO:0000256|HAMAP-Rule:MF_01376, ECO:0000256|SAAS:SAAS00009569};; 2-aminoethylphosphonate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01376}; AEP transaminase {ECO:0000256|HAMAP-Rule:MF_01376}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
2-aminoethylphosphonate--pyruvate transaminase n=1 Tax=Clostridium sp. D5 RepID=F0Z033_9CLOT
hypothetical protein
L3_060_043G1_scaffold_38_4
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3675..6296)
DNA (2622bp) protein (874aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TVY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67469.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
ABC-type Fe3+ transport system, permease component
L3_060_043G1_scaffold_38_5
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6315..7094)
DNA (780bp) protein (260aa)
ABC-type spermidine/putrescine transport systems, ATPase components (EC:3.6.3.31)
ABC transporter, ATP-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQ00_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEQ60094.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L3_060_043G1_scaffold_38_6
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7274..8143)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5WS61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA05425.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
RpiR family transcriptional regulator
L3_060_043G1_scaffold_38_7
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8430..9671
DNA (1242bp) protein (414aa)
Ammonium transporter n=1 Tax=Roseburia sp. CAG:45 RepID=R6NF15_9FIRM
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
ammonium transporter
L3_060_043G1_scaffold_38_8
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9686..10042
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NHU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC10750.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
nitrogen regulatory protein P-II
L3_060_043G1_scaffold_38_9
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10095..11240)
DNA (1146bp) protein (382aa)
glucose-1-phosphate adenylyltransferase, GlgD subunit (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase, GlgD subunit n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AMA9_9CLOT
Glucose-1-phosphate adenylyltransferase, GlgD subunit {ECO:0000313|EMBL:ERI66989.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
L3_060_043G1_scaffold_38_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11234..12442)
DNA (1209bp) protein (403aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; Glucose-1-phosphate adenylyltransferase; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=9 Tax=Clostridium RepID=G5I3S1_9CLOT
L3_060_043G1_scaffold_38_11
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(12609..14273)
DNA (1665bp) protein (555aa)
Glycosidases (EC:3.2.1.10)
Oligo-1 6-glucosidase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RGZ3_9FIRM
Oligo-1 6-glucosidase {ECO:0000313|EMBL:CDC48133.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_060_043G1_scaffold_38_12
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

14428..15330
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RS32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC48134.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
AraC-type DNA-binding domain-containing proteins
L3_060_043G1_scaffold_38_13
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15450..16838)
DNA (1389bp) protein (463aa)
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EEX20096.1}; EC=2.1.1.- {ECO:0000313|EMBL:EEX20096.1};; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LCG7_BLAHA
L3_060_043G1_scaffold_38_14
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16919..17146)
DNA (228bp) protein (76aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=C9LCG8_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:EEX20097.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
hypothetical protein
L3_060_043G1_scaffold_38_15
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17289..19502)
DNA (2214bp) protein (738aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
ATP-dependent DNA helicase PcrA (EC:3.6.1.-)
ATP-dependent DNA helicase PcrA n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6PIF9_9FIRM
L3_060_043G1_scaffold_38_16
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(19645..20922)
DNA (1278bp) protein (426aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
adenylosuccinate synthase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RE48_9FIRM
L3_060_043G1_scaffold_38_17
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21013..22290)
DNA (1278bp) protein (426aa)
Na+/H+ antiporter family protein n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NN91_9FIRM
Na+/H+ antiporter family protein {ECO:0000313|EMBL:CDC07686.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
putative methionine transporter, NhaC family (TC 2.A.35.1.-)
L3_060_043G1_scaffold_38_18
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22397..23830)
DNA (1434bp) protein (478aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=2 Tax=Lachnospiraceae RepID=F3AC72_9FIRM
L3_060_043G1_scaffold_38_19
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23914..24690)
DNA (777bp) protein (259aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3AC73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG79882.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
hypothetical protein
L3_060_043G1_scaffold_38_20
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(24704..25951)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RVV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC47166.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L3_060_043G1_scaffold_38_21
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(25963..29499)
DNA (3537bp) protein (1179aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SKR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC47167.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L3_060_043G1_scaffold_38_22
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

29653..30759
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RE60_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC47168.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L3_060_043G1_scaffold_38_23
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30858..31727)
DNA (870bp) protein (290aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3AC77_9FIRM
L3_060_043G1_scaffold_38_24
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(31872..36353)
DNA (4482bp) protein (1494aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
DNA polymerase III polC-type n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RVW6_9FIRM
DNA polymerase III subunit alpha
L3_060_043G1_scaffold_38_25
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

comp(36373..37425)
DNA (1053bp) protein (351aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6V4F4_9FIRM
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
L3_060_043G1_scaffold_38_26
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(37439..38581)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RHC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC47180.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
toxic anion resistance family protein
L3_060_043G1_scaffold_38_27
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38585..39868)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=C9LA74_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:CDC08268.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
5-bromo-4-chloroindolyl phosphate hydrolysis protein.
L3_060_043G1_scaffold_38_28
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

40089..41114
DNA (1026bp) protein (342aa)
branched-chain amino acid aminotransferase, group II (EC:2.6.1.42)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RVX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC47186.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_060_043G1_scaffold_38_29
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(41149..42507)
DNA (1359bp) protein (453aa)
Glucose-6-phosphate isomerase {ECO:0000256|RuleBase:RU000612, ECO:0000256|SAAS:SAAS00031329}; EC=5.3.1.9 {ECO:0000256|RuleBase:RU000612, ECO:0000256|SAAS:SAAS00031329};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RE88_9FIRM
L3_060_043G1_scaffold_38_30
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(42574..44061)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RHE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC47200.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Uncharacterized conserved protein (DUF2088).
Displaying items 1-30 of 120 in total

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