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L3_060_043G1_scaffold_39

Search features with annotation key words

Displaying items 1-30 of 129 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_043G1_scaffold_39_1
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..247
DNA (246bp) protein (82aa)
Glutamate synthase (NADPH), homotetrameric n=3 Tax=Clostridium butyricum DKU-01 RepID=M8J7L7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ90163.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
oxidoreductase
L3_060_043G1_scaffold_39_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

665..787
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AH91_CLOBU
Transporter, major facilitator family {ECO:0000313|EMBL:ETI88477.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
L3_060_043G1_scaffold_39_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

920..1468
DNA (549bp) protein (183aa)
UPI0003D693EB related cluster n=1 Tax=unknown RepID=UPI0003D693EB
Uncharacterized protein {ECO:0000313|EMBL:ETI88476.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
L3_060_043G1_scaffold_39_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1573..2307
DNA (735bp) protein (245aa)
UPI0003D5EAF7 related cluster n=1 Tax=unknown RepID=UPI0003D5EAF7
Copper homeostasis protein CutC {ECO:0000313|EMBL:KHD15082.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
Uncharacterized protein involved in copper resistance
L3_060_043G1_scaffold_39_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2421..3728)
DNA (1308bp) protein (436aa)
Sensory transduction protein kinase n=2 Tax=Clostridium butyricum RepID=B1QY00_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83195.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
integral membrane sensor signal transduction histidine kinase
L3_060_043G1_scaffold_39_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3721..4410)
DNA (690bp) protein (230aa)
Regulatory protein VanR n=4 Tax=Clostridium butyricum RepID=B1QXZ9_CLOBU
Two-component system response regulator {ECO:0000313|EMBL:ENZ35707.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Two component transcriptional regulator, winged helix family
L3_060_043G1_scaffold_39_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4616..5293
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AH93_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35708.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
SNARE -like protein
L3_060_043G1_scaffold_39_8
unknown

Not on your lists

5287..5376
DNA (90bp) protein (30aa)

This feature has no annotations

L3_060_043G1_scaffold_39_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5354..5854
DNA (501bp) protein (167aa)
CDP-diacylglycerol--serine O-phosphatidyltransferase {ECO:0000313|EMBL:KJZ83267.1}; EC=2.7.8.8 {ECO:0000313|EMBL:KJZ83267.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
CDP-diacylglycerol-serine O-phosphatidyltransferase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ASL7_CLOBU
CDP-diacylglycerol/serine O-phosphatidyltransferase
L3_060_043G1_scaffold_39_10
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5997..6203)
DNA (207bp) protein (69aa)
Transcription regulator, Cro/CI family-related protein n=4 Tax=Clostridium butyricum RepID=B1QXZ5_CLOBU
Transcriptional regulator, Cro/CI family {ECO:0000313|EMBL:KJZ92275.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
putative transcriptional regulator
L3_060_043G1_scaffold_39_11
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6216..6704)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z794_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ90055.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
L3_060_043G1_scaffold_39_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6750..6965)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AUP1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83205.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
lipoprotein
L3_060_043G1_scaffold_39_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7283..7558
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AHA1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35718.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L3_060_043G1_scaffold_39_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7688..9562
DNA (1875bp) protein (625aa)
Heavy metal translocating P-type ATPase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ASM2_CLOBU
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ENZ35719.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L3_060_043G1_scaffold_39_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10634..11107
DNA (474bp) protein (158aa)
YiaL n=3 Tax=Clostridium butyricum RepID=B1QXZ0_CLOBU
YiaL {ECO:0000313|EMBL:EEP54202.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L3_060_043G1_scaffold_39_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11158..12156
DNA (999bp) protein (333aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=N9Z797_CLOBU
Oxidoreductase {ECO:0000313|EMBL:KJZ83244.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
oxidoreductase
L3_060_043G1_scaffold_39_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12312..13670
DNA (1359bp) protein (453aa)
Citrate transporter n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AUP6_CLOBU
Putative transporter protein {ECO:0000313|EMBL:KJZ83240.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
citrate transporter
L3_060_043G1_scaffold_39_18
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13884..16013
DNA (2130bp) protein (710aa)
N-methylhydaintoinase A n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JH36_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ92251.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
hydantoinase/oxoprolinase
L3_060_043G1_scaffold_39_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16003..16749
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ASM5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35724.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L3_060_043G1_scaffold_39_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16818..17708)
DNA (891bp) protein (297aa)
Transcriptional regulator n=2 Tax=Clostridium butyricum RepID=M8KC19_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83189.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
LysR family transcriptional regulator
L3_060_043G1_scaffold_39_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18067..18633
DNA (567bp) protein (189aa)
P-loop ATPase n=4 Tax=Clostridium butyricum RepID=B1QXY4_CLOBU
Phosphate starvation-inducible protein PhoH, predicted ATPase {ECO:0000313|EMBL:KJZ83232.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
P-loop ATPase
L3_060_043G1_scaffold_39_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18852..19778
DNA (927bp) protein (309aa)
Exonuclease, DNA polymerase III, epsilon subunit n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AUP9_CLOBU
Putative DNA polymerase III epsilon chain {ECO:0000313|EMBL:KJZ83220.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
DNA polymerase III subunit epsilon
L3_060_043G1_scaffold_39_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20082..20504
DNA (423bp) protein (141aa)
UPI0003D5F69D related cluster n=1 Tax=unknown RepID=UPI0003D5F69D
Uncharacterized protein {ECO:0000313|EMBL:ETI88451.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
L3_060_043G1_scaffold_39_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21203..22630
DNA (1428bp) protein (476aa)
Sodium:alanine symporter family protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K3T1_CLOBU
Sodium:alanine symporter family protein {ECO:0000313|EMBL:ETI88450.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
sodium:alanine symporter family protein
L3_060_043G1_scaffold_39_25
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22763..23035)
DNA (273bp) protein (91aa)
acyP; acylphosphatase AcyP (EC:3.6.1.7)
Acylphosphatase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KC15_CLOBU
Acylphosphatase {ECO:0000256|SAAS:SAAS00255930}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
L3_060_043G1_scaffold_39_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23243..23656
DNA (414bp) protein (138aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Nucleoside diphosphate kinase n=4 Tax=Clostridium butyricum RepID=B1QXX9_CLOBU
nucleoside-diphosphate kinase
L3_060_043G1_scaffold_39_27
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23759..24823)
DNA (1065bp) protein (355aa)
Spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein n=4 Tax=Clostridium butyricum RepID=B1QXX8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83198.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
spermidine/putrescine ABC transporter spermidine/putrescine-binding protein
L3_060_043G1_scaffold_39_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24885..25670)
DNA (786bp) protein (262aa)
Spermidine/putrescine transport system permease protein PotC n=3 Tax=Clostridium butyricum RepID=B1QXX7_CLOBU
Spermidine/putrescine ABC transporter, permease protein {ECO:0000313|EMBL:EEP54749.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
spermidine/putrescine transport system permease protein PotC
L3_060_043G1_scaffold_39_29
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25664..26506)
DNA (843bp) protein (281aa)
Putrescine transport system permease protein PotH n=3 Tax=Clostridium butyricum RepID=B1QXX6_CLOBU
Spermidine Putrescine ABC transporter permease component PotB {ECO:0000313|EMBL:KJZ83204.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putrescine transport system permease protein PotH
L3_060_043G1_scaffold_39_30
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26499..27548)
DNA (1050bp) protein (350aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
spermidine/putrescine import ATP-binding protein PotA (EC:3.6.3.31)
Spermidine/putrescine import ATP-binding protein PotA n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KC11_CLOBU
Displaying items 1-30 of 129 in total

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