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L3_060_043G1_scaffold_59

Search features with annotation key words

Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_043G1_scaffold_59_1
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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244..957
DNA (714bp) protein (238aa)
TnpX site-specific recombinase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PBT8_9FIRM
TnpX site-specific recombinase {ECO:0000313|EMBL:EDS11063.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_060_043G1_scaffold_59_2
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1119..2594)
DNA (1476bp) protein (492aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NA05_9FIRM
tRNA-i(6)A37 thiotransferase enzyme MiaB
L3_060_043G1_scaffold_59_3
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2672..3118)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9K9Q7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS43078.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
hypothetical protein
L3_060_043G1_scaffold_59_4
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3294..3545
DNA (252bp) protein (84aa)
Response regulator receiver domain protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZPI0_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDM88776.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
L3_060_043G1_scaffold_59_5
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3464..4015)
DNA (552bp) protein (184aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
5,10-methenyltetrahydrofolate synthetase (EC:6.3.3.2)
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NKJ2_9FIRM
L3_060_043G1_scaffold_59_6
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3993..4214)
DNA (222bp) protein (74aa)
UPF0291 protein BLAHAN_04734 n=3 Tax=Lachnospiraceae RepID=C9L5S7_BLAHA
UPF0291 protein BN627_00122 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
hypothetical protein
L3_060_043G1_scaffold_59_7
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4230..5084)
DNA (855bp) protein (285aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
glutamate 5-kinase (EC:2.7.2.11)
Glutamate 5-kinase n=3 Tax=Lachnospiraceae RepID=C9L5S6_BLAHA
L3_060_043G1_scaffold_59_8
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5166..5654)
DNA (489bp) protein (163aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=C9L5S5_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:EEX22507.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
hypothetical protein
L3_060_043G1_scaffold_59_9
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5737..6231)
DNA (495bp) protein (165aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
Endoribonuclease YbeY n=3 Tax=Lachnospiraceae RepID=C9L5S4_BLAHA
hypothetical protein
L3_060_043G1_scaffold_59_10
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(6234..7253)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RSY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC46221.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Phosphate starvation-inducible protein PhoH, predicted ATPase
L3_060_043G1_scaffold_59_11
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(7246..8475)
DNA (1230bp) protein (410aa)
Putative sporulation protein YqfD n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SHV5_9FIRM
Putative sporulation protein YqfD {ECO:0000313|EMBL:CDC46222.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Putative stage IV sporulation protein YqfD.
L3_060_043G1_scaffold_59_12
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8489..8764)
DNA (276bp) protein (92aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=R6NCF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC08855.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
YabP family.
L3_060_043G1_scaffold_59_13
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8804..9343)
DNA (540bp) protein (180aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=C9L5S0_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:EEX22502.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
Predicted metal-binding protein
L3_060_043G1_scaffold_59_14
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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9443..9895
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RBK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC42654.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Protein of unknown function (DUF2726).
L3_060_043G1_scaffold_59_15
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(10625..14098)
DNA (3474bp) protein (1158aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RLP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC46234.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ATPase involved in DNA repair
L3_060_043G1_scaffold_59_16
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14064..15305)
DNA (1242bp) protein (414aa)
Exodeoxyribonuclease I subunit D (EC:3.1.11.1)
Exonuclease SbcCD, D subunit n=3 Tax=Lachnospiraceae RepID=C9L5R8_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:EGG81977.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
L3_060_043G1_scaffold_59_17
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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15474..16223
DNA (750bp) protein (250aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
Prolipoprotein diacylglyceryl transferase n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L5R6_BLAHA
prolipoprotein diacylglyceryl transferase
L3_060_043G1_scaffold_59_18
unknown

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16292..16396
DNA (105bp) protein (35aa)

This feature has no annotations

L3_060_043G1_scaffold_59_19
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(16473..17135)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RLQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC46244.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Uncharacterised protein family (UPF0153).
L3_060_043G1_scaffold_59_20
unknown

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comp(17163..17633)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000364FE02
L3_060_043G1_scaffold_59_21
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(17661..19679)
DNA (2019bp) protein (673aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
Putative DNA helicase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RLQ7_9FIRM
L3_060_043G1_scaffold_59_22
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19694..20866)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2AUQ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ32967.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
major facilitator superfamily protein
L3_060_043G1_scaffold_59_23
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(21054..22067)
DNA (1014bp) protein (338aa)
Predicted oxidoreductase aldo/keto reductase family with a ferredoxin domain n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RLS3_9FIRM
Predicted oxidoreductase aldo/keto reductase family with a ferredoxin domain {ECO:0000313|EMBL:CDC46264.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
NADP-dependent oxidoreductase domain containing protein
L3_060_043G1_scaffold_59_24
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(22101..22400)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RBH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC46268.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Stress responsive A/B Barrel Domain.
L3_060_043G1_scaffold_59_25
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22483..23544)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NH45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC10485.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
hypothetical protein
L3_060_043G1_scaffold_59_26
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23634..24242)
DNA (609bp) protein (203aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Lachnospiraceae RepID=C9L5Q1_BLAHA
L3_060_043G1_scaffold_59_27
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24267..25316)
DNA (1050bp) protein (350aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NQ27_9FIRM
ribosomal RNA small subunit methyltransferase H
L3_060_043G1_scaffold_59_28
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25343..26362)
DNA (1020bp) protein (340aa)
Kinase, PfkB family n=2 Tax=Lachnospiraceae RepID=C9L5P9_BLAHA
Kinase, PfkB family {ECO:0000313|EMBL:EEX22481.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
PfkB family carbohydrate kinase
L3_060_043G1_scaffold_59_29
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26392..26730)
DNA (339bp) protein (113aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=R6LQ40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB85659.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L3_060_043G1_scaffold_59_30
unknown

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comp(26874..26972)
DNA (99bp) protein (33aa)

This feature has no annotations

Displaying items 1-30 of 96 in total

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