ggKbase home page

L3_060_043G1_scaffold_137

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_043G1_scaffold_137_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..690)
DNA (690bp) protein (230aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RBK9_CLOPF
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT22385.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
ABC transporter ATP-binding protein
L3_060_043G1_scaffold_137_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1238..1435)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RBL0_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT22378.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
L3_060_043G1_scaffold_137_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1487..2500)
DNA (1014bp) protein (338aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
sensor histidine kinase (EC:2.7.3.-)
Sensor histidine kinase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RBL1_CLOPF
L3_060_043G1_scaffold_137_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2491..3177)
DNA (687bp) protein (229aa)
DNA-binding response regulator n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RBL2_CLOPF
DNA-binding response regulator {ECO:0000313|EMBL:EDT22372.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
two-component response regulator
L3_060_043G1_scaffold_137_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3317..4117)
DNA (801bp) protein (267aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=Q8XP47_CLOPE
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT15503.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_060_043G1_scaffold_137_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4233..5483
DNA (1251bp) protein (417aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=Q8XP48_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79823.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_060_043G1_scaffold_137_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5495..6667
DNA (1173bp) protein (391aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1BS84_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT15493.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_060_043G1_scaffold_137_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6680..7639
DNA (960bp) protein (320aa)
Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RBL6_CLOPF
Putative N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EDT22383.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
N-acetylmuramoyl-L-alanine amidase
L3_060_043G1_scaffold_137_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7697..7921)
DNA (225bp) protein (75aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CRR1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15488.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_060_043G1_scaffold_137_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8214..8441)
DNA (228bp) protein (76aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CRR0_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT27373.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_060_043G1_scaffold_137_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8590..9948)
DNA (1359bp) protein (453aa)
Conserved domain protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RBL9_CLOPF
Conserved domain protein {ECO:0000313|EMBL:EDT22369.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
L3_060_043G1_scaffold_137_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10392..10643
DNA (252bp) protein (84aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CRQ8_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18652.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_060_043G1_scaffold_137_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10749..12170
DNA (1422bp) protein (474aa)
Thiamine biosynthesis protein ThiH n=2 Tax=Clostridium perfringens RepID=H7CRQ7_CLOPF
Thiamine biosynthesis protein ThiH {ECO:0000313|EMBL:EIA18651.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
thiH; thiamine biosynthesis protein ThiH
L3_060_043G1_scaffold_137_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12992..13276
DNA (285bp) protein (95aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CRQ6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15471.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_060_043G1_scaffold_137_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14047..15369
DNA (1323bp) protein (441aa)
GTP-binding protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RBM4_CLOPF
GTP-binding protein {ECO:0000313|EMBL:EDT22380.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
GTP-binding protein
L3_060_043G1_scaffold_137_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15505..16377)
DNA (873bp) protein (291aa)
Putative membrane protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V4J1_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDT71288.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
L3_060_043G1_scaffold_137_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16489..17229)
DNA (741bp) protein (247aa)
Putative membrane protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TUX5_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79812.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_060_043G1_scaffold_137_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17437..17877)
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TUX6_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79811.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_060_043G1_scaffold_137_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17996..19171)
DNA (1176bp) protein (392aa)
Putative membrane protein n=2 Tax=Clostridium perfringens RepID=Q0TUX7_CLOP1
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT22666.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_060_043G1_scaffold_137_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19797..20750
DNA (954bp) protein (318aa)
ldh; L-lactate dehydrogenase (EC:1.1.1.27)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L-lactate dehydrogenase n=9 Tax=Clostridium perfringens RepID=LDH_CLOP1
L3_060_043G1_scaffold_137_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21149..21421)
DNA (273bp) protein (91aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=H7CRP9_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79808.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_060_043G1_scaffold_137_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21698..23131)
DNA (1434bp) protein (478aa)
Drug resistance transporter, EmrB/QacA family n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RAT6_CLOPF
Drug resistance transporter, EmrB/QacA family {ECO:0000313|EMBL:EDT22654.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
multidrug resistance protein
L3_060_043G1_scaffold_137_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23491..25239)
DNA (1749bp) protein (583aa)
Dihydroxyacetone kinase family protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RAT5_CLOPF
Dihydroxyacetone kinase family protein {ECO:0000313|EMBL:EDT22657.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
dihydroxyacetone kinase
L3_060_043G1_scaffold_137_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25265..26395)
DNA (1131bp) protein (377aa)
gldA; glycerol dehydrogenase (EC:1.1.1.6)
Glycerol dehydrogenase {ECO:0000313|EMBL:EDT13627.1}; EC=1.1.1.6 {ECO:0000313|EMBL:EDT13627.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Glycerol dehydrogenase n=9 Tax=Clostridium perfringens RepID=H7CRP6_CLOPF
L3_060_043G1_scaffold_137_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27015..27323
DNA (309bp) protein (103aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CRP5_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT13647.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_060_043G1_scaffold_137_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27734..28870)
DNA (1137bp) protein (379aa)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:EDT13634.1}; EC=1.3.8.1 {ECO:0000313|EMBL:EDT13634.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Acyl-CoA dehydrogenase n=7 Tax=Clostridium perfringens RepID=Q8XP68_CLOPE
acdS; acyl-CoA dehydrogenase
L3_060_043G1_scaffold_137_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28974..30524)
DNA (1551bp) protein (517aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
propionate CoA-transferase (EC:2.8.3.1)
Acetate CoA-transferase YdiF n=2 Tax=Clostridium perfringens RepID=Q0TUY5_CLOP1
L3_060_043G1_scaffold_137_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30627..31403)
DNA (777bp) protein (259aa)
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.55)
3-hydroxybutyryl-CoA dehydratase {ECO:0000313|EMBL:EDS81748.1}; EC=4.2.1.55 {ECO:0000313|EMBL:EDS81748.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
3-hydroxybutyryl-CoA dehydratase n=4 Tax=Clostridium perfringens RepID=H7CRP2_CLOPF
L3_060_043G1_scaffold_137_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31635..32393)
DNA (759bp) protein (253aa)
Formate/nitrite transporter family protein n=2 Tax=Clostridium perfringens RepID=Q0TUY7_CLOP1
formate/nitrite transporter family protein
Formate/nitrite transporter family protein {ECO:0000313|EMBL:EDT22672.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_060_043G1_scaffold_137_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32765..33814)
DNA (1050bp) protein (350aa)
Oxidoreductase, Gfo/Idh/MocA family n=4 Tax=Clostridium perfringens RepID=Q0TUY8_CLOP1
Gfo/Idh/MocA family oxidoreductase
Oxidoreductase, Gfo/Idh/MocA family {ECO:0000313|EMBL:EDT22662.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Displaying items 1-30 of 41 in total

View Taxonomy