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L3_060_043G1_scaffold_140

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_043G1_scaffold_140_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(334..525)
DNA (192bp) protein (64aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CZX8_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82325.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_060_043G1_scaffold_140_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(635..1114)
DNA (480bp) protein (160aa)
MutT/nudix family protein n=2 Tax=Clostridium perfringens RepID=H7CZX9_CLOPF
MutT/nudix family protein {ECO:0000313|EMBL:EIA15754.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
MutT/nudix family protein
L3_060_043G1_scaffold_140_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1242..2528)
DNA (1287bp) protein (429aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Adenylosuccinate synthetase n=8 Tax=Clostridium perfringens RepID=PURA_CLOPE
purA; adenylosuccinate synthetase
L3_060_043G1_scaffold_140_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3009..3689
DNA (681bp) protein (227aa)
sdhB; L-serine dehydratase, iron-sulfur-dependent subunit beta (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, beta subunit {ECO:0000313|EMBL:EDT13472.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EDT13472.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L-serine dehydratase, iron-sulfur-dependent, beta subunit n=9 Tax=Clostridium perfringens RepID=H7CZY1_CLOPF
L3_060_043G1_scaffold_140_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3690..4571
DNA (882bp) protein (294aa)
sdhA; L-serine dehydratase, iron-sulfur-dependent subunit alpha (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit n=7 Tax=Clostridium perfringens RepID=H7CZY2_CLOPF
Probable L-serine dehydratase alpha subunit {ECO:0000313|EMBL:BAB82330.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_060_043G1_scaffold_140_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4807..5979
DNA (1173bp) protein (391aa)
Putative sugar isomerase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RAX7_CLOPF
Putative sugar isomerase {ECO:0000313|EMBL:EDT22622.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
sugar isomerase
L3_060_043G1_scaffold_140_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5999..6856
DNA (858bp) protein (286aa)
gatY; tagatose-bisphosphate aldolase (EC:4.1.2.2)
Putative tagatose-1,6-bisphosphate aldolase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RAX6_CLOPF
Putative tagatose-1,6-bisphosphate aldolase {ECO:0000313|EMBL:EDT22619.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_060_043G1_scaffold_140_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6913..7638)
DNA (726bp) protein (242aa)
GntR family transcriptional regulator n=3 Tax=Clostridium perfringens RepID=H7CZY5_CLOPF
GntR family transcriptional regulator {ECO:0000313|EMBL:EIA15760.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
GntR family transcriptional regulator
L3_060_043G1_scaffold_140_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7775..8038)
DNA (264bp) protein (88aa)
Preprotein translocase, YajC subunit n=5 Tax=Clostridium perfringens RepID=H1CVV7_CLOPF
Putative preprotein translocase subunit {ECO:0000313|EMBL:EIA15761.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
preprotein translocase subunit
L3_060_043G1_scaffold_140_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8055..8459)
DNA (405bp) protein (135aa)
PTS system, IIA component n=5 Tax=Clostridium perfringens RepID=Q0TM21_CLOP1
PTS system transporter subunit IIA
PTS system, IIA component {ECO:0000313|EMBL:EDS80504.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_060_043G1_scaffold_140_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8632..9438)
DNA (807bp) protein (269aa)
PTS system, IID component n=6 Tax=Clostridium perfringens RepID=H7CZY8_CLOPF
PTS system transporter subunit IID
PTS system, IID component {ECO:0000313|EMBL:EIA15763.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_060_043G1_scaffold_140_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9438..10229)
DNA (792bp) protein (264aa)
PTS system, IIC component n=10 Tax=Clostridium perfringens RepID=H7CZY9_CLOPF
PTS system transporter subunit IIC
PTS system, IIC component {ECO:0000313|EMBL:EDT13467.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_060_043G1_scaffold_140_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10276..10764)
DNA (489bp) protein (163aa)
PTS system, IIB component n=5 Tax=Clostridium perfringens RepID=H7CZZ0_CLOPF
PTS system transporter subunit IIB
PTS system, IIB component {ECO:0000313|EMBL:EIA15765.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_060_043G1_scaffold_140_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11042..11842)
DNA (801bp) protein (267aa)
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Pyrroline-5-carboxylate reductase n=3 Tax=Clostridium perfringens RepID=Q0TM17_CLOP1
L3_060_043G1_scaffold_140_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12020..13354)
DNA (1335bp) protein (445aa)
dnaB; replicative DNA helicase (EC:3.6.1.-)
Replicative DNA helicase {ECO:0000313|EMBL:EDT13466.1}; EC=3.6.1.- {ECO:0000313|EMBL:EDT13466.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Replicative DNA helicase n=7 Tax=Clostridium perfringens RepID=Q0TM16_CLOP1
L3_060_043G1_scaffold_140_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13770..15668)
DNA (1899bp) protein (633aa)
ATP-dependent protease n=9 Tax=Clostridium perfringens RepID=H7CZZ3_CLOPF
ATP-dependent protease {ECO:0000313|EMBL:EIA15768.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
ATP-dependent protease
L3_060_043G1_scaffold_140_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15684..16130)
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=11 Tax=Clostridium perfringens RepID=RL9_CLOP1
rplI; 50S ribosomal protein L9
50S ribosomal protein L9 {ECO:0000255|HAMAP-Rule:MF_00503}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_060_043G1_scaffold_140_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16132..18090)
DNA (1959bp) protein (653aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=Q8XH48_CLOPE
DHH family protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82343.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_060_043G1_scaffold_140_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18123..19118)
DNA (996bp) protein (332aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XH47_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82344.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_060_043G1_scaffold_140_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19136..19453)
DNA (318bp) protein (106aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CZZ7_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT13480.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_060_043G1_scaffold_140_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19736..19978)
DNA (243bp) protein (81aa)
30S ribosomal protein S18 n=11 Tax=Clostridium perfringens RepID=RS18_CLOP1
rpsR; 30S ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_060_043G1_scaffold_140_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20009..20461)
DNA (453bp) protein (151aa)
Single-stranded DNA-binding protein n=10 Tax=Clostridium perfringens RepID=SSB_CLOPE
ssb; single-strand binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_060_043G1_scaffold_140_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(20475..20762)
DNA (288bp) protein (96aa)
30S ribosomal protein S6 n=11 Tax=Clostridium perfringens RepID=RS6_CLOP1
rpsF; 30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_060_043G1_scaffold_140_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20906..21118)
DNA (213bp) protein (71aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7D001_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82349.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_060_043G1_scaffold_140_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21155..22015)
DNA (861bp) protein (287aa)
Mechanosensitive ion channel family protein n=7 Tax=Clostridium perfringens RepID=Q0TM06_CLOP1
mechanosensitive ion channel family protein
Mechanosensitive ion channel family protein {ECO:0000313|EMBL:EDT13617.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_060_043G1_scaffold_140_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22048..22281)
DNA (234bp) protein (78aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7D003_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA15778.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_060_043G1_scaffold_140_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22441..23157
DNA (717bp) protein (239aa)
LysE family translocator protein n=9 Tax=Clostridium perfringens RepID=H7D004_CLOPF
LysE family translocator protein
Translocator protein, LysE family {ECO:0000313|EMBL:EDT13599.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_060_043G1_scaffold_140_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23100..24260
DNA (1161bp) protein (387aa)
Cysteine desulfurase family protein n=2 Tax=Clostridium perfringens RepID=B1BXH1_CLOPF
Cysteine desulfurase family protein {ECO:0000313|EMBL:EDT13620.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
nifS; cysteine desulfurase
L3_060_043G1_scaffold_140_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24272..25336
DNA (1065bp) protein (355aa)
Sporulation integral membrane protein YtvI n=4 Tax=Clostridium perfringens RepID=B1RAV4_CLOPF
Sporulation integral membrane protein YtvI {ECO:0000313|EMBL:EDT22635.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
sporulation integral membrane protein YtvI
L3_060_043G1_scaffold_140_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25386..25976
DNA (591bp) protein (197aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=Q8XH36_CLOPE
sporulation protein YyaC
Putative sporulation protein YyaC {ECO:0000313|EMBL:EIA15782.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Displaying items 1-30 of 48 in total

View Taxonomy