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L3_060_043G1_scaffold_277

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_043G1_scaffold_277_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(180..1361)
DNA (1182bp) protein (394aa)
Pyrimidine nucleoside transporter n=5 Tax=Clostridium perfringens RepID=Q8XKV8_CLOPE
pyrimidine nucleoside transporter
Nucleoside transporter, NupC family {ECO:0000313|EMBL:EDT27601.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_060_043G1_scaffold_277_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1747..3645)
DNA (1899bp) protein (633aa)
Putative membrane protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R5W9_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDT24364.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
L3_060_043G1_scaffold_277_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3691..4116)
DNA (426bp) protein (142aa)
Transcriptional regulator, MarR family n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0STF2_CLOPS
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABG86925.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_060_043G1_scaffold_277_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4400..5497)
DNA (1098bp) protein (366aa)
Peptidase, S41 family n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TR02_CLOP1
S41 family peptidase
Peptidase, S41 family {ECO:0000313|EMBL:EDS79431.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_060_043G1_scaffold_277_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5825..6235
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CQW4_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS79418.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L3_060_043G1_scaffold_277_6
R_OD1_Kaiserbacteria_55_20, Kaiserbacteria, Parcubacteria, Bacteria

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comp(6558..9014)
DNA (2457bp) protein (819aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000371B1FD
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_55_20_curated
L3_060_043G1_scaffold_277_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10616..11194)
DNA (579bp) protein (193aa)
xpt; xanthine phosphoribosyltransferase (EC:2.4.2.22)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Xanthine phosphoribosyltransferase 2 n=11 Tax=Clostridium perfringens RepID=XPT2_CLOP1
L3_060_043G1_scaffold_277_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11367..12356
DNA (990bp) protein (330aa)
Tetratricopeptide repeat protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R5W1_CLOPF
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDT24465.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
L3_060_043G1_scaffold_277_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12702..13310)
DNA (609bp) protein (203aa)
Putative lipoprotein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1REH4_CLOPF
Putative lipoprotein {ECO:0000313|EMBL:EDT27597.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
putative lipoprotein
L3_060_043G1_scaffold_277_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13752..14222)
DNA (471bp) protein (157aa)
SsrA-binding protein n=11 Tax=Clostridium perfringens RepID=SSRP_CLOP1
smpB; SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_060_043G1_scaffold_277_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14970..17225)
DNA (2256bp) protein (752aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
rnr; ribonuclease R (EC:3.1.-.-)
Ribonuclease R n=1 Tax=Clostridium perfringens F262 RepID=H7CVX5_CLOPF
L3_060_043G1_scaffold_277_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17516..17746)
DNA (231bp) protein (77aa)
Preprotein translocase subunit SecG n=5 Tax=Clostridium perfringens RepID=H7CVX6_CLOPF
secG; preprotein translocase subunit SecG
Preprotein translocase subunit SecG {ECO:0000313|EMBL:EIA17201.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_060_043G1_scaffold_277_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17936..18493)
DNA (558bp) protein (186aa)
Putative tryptophan transport protein n=1 Tax=Clostridium perfringens F262 RepID=H7CVX7_CLOPF
Putative tryptophan transport protein {ECO:0000313|EMBL:EIA17202.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
tryptophan transport protein
L3_060_043G1_scaffold_277_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19891..21186)
DNA (1296bp) protein (432aa)
eno; phosphopyruvate hydratase (EC:4.2.1.11)
Enolase {ECO:0000255|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000255|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000255|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000255|HAMAP-Rule:MF_00318}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Enolase n=8 Tax=Clostridium perfringens RepID=ENO_CLOP1
L3_060_043G1_scaffold_277_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21553..21693)
DNA (141bp) protein (47aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CVX9_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT13690.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_060_043G1_scaffold_277_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21893..22867)
DNA (975bp) protein (325aa)
Amino acid antiporter n=5 Tax=Clostridium perfringens RepID=H7CVY0_CLOPF
Glutamate:gamma-aminobutyrate antiporter family protein {ECO:0000313|EMBL:EDT13694.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
amino acid antiporter
Displaying 16 items

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