ggKbase home page

L3_060_043G1_scaffold_310

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_043G1_scaffold_310_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..139
DNA (138bp) protein (46aa)
Membrane protein insertase YidC n=1 Tax=Escherichia coli 2726950 RepID=N2KPZ3_ECOLX
membrane protein insertase
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=1444163 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-250-04_S3_C2.;"
L3_060_043G1_scaffold_310_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

245..1609
DNA (1365bp) protein (455aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
tRNA modification GTPase MnmE n=2 Tax=Escherichia coli RepID=L2VGH7_ECOLX
trmE; tRNA modification GTPase TrmE
L3_060_043G1_scaffold_310_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2146..3561
DNA (1416bp) protein (472aa)
tryptophanase (EC:4.1.99.1)
Tryptophanase {ECO:0000256|HAMAP-Rule:MF_00544, ECO:0000256|SAAS:SAAS00048909}; EC=4.1.99.1 {ECO:0000256|HAMAP-Rule:MF_00544, ECO:0000256|SAAS:SAAS00048909};; L-tryptophan indole-lyase {ECO:0000256|HAMAP-Rule:MF_00544}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
Tryptophanase n=850 Tax=Enterobacteriaceae RepID=TNAA_ECO24
L3_060_043G1_scaffold_310_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3652..4899
DNA (1248bp) protein (416aa)
Low affinity tryptophan permease n=322 Tax=Enterobacteriaceae RepID=Q5UEU4_ECOLX
tryptophan permease TnaB
Tryptophan permease {ECO:0000313|EMBL:EOW02034.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
L3_060_043G1_scaffold_310_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5031..6206
DNA (1176bp) protein (392aa)
Multidrug resistance protein MdtL n=252 Tax=Escherichia RepID=MDTL_ECO55
multidrug resistance protein
Multidrug resistance protein MdtL {ECO:0000256|HAMAP-Rule:MF_01530}; TaxID=1444126 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C1.;"
L3_060_043G1_scaffold_310_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6181..7140
DNA (960bp) protein (320aa)
HTH-type transcriptional regulator YidZ n=137 Tax=Bacteria RepID=YIDZ_ECOBW
LysR family transcriptional regulator
HTH-type transcriptional regulator YidZ {ECO:0000256|HAMAP-Rule:MF_01607}; TaxID=670892 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3431.;"
L3_060_043G1_scaffold_310_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7297..8046
DNA (750bp) protein (250aa)
Predicted phosphopantetheinyl transferase n=225 Tax=Enterobacteriaceae RepID=C6UI34_ECOBR
phosphopantetheinyl transferase
Putative uncharacterized protein {ECO:0000313|EMBL:EFZ58959.1}; TaxID=670890 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LT-68.;"
L3_060_043G1_scaffold_310_8
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8068..8634
DNA (567bp) protein (189aa)
Uncharacterized protein YieF n=694 Tax=cellular organisms RepID=YIEF_ECO57
NADPH-dependent FMN reductase
Uncharacterized protein {ECO:0000313|EMBL:AIL43020.1}; TaxID=1282358 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri Shi06HN006.;"
L3_060_043G1_scaffold_310_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8688..10025)
DNA (1338bp) protein (446aa)
Inner membrane protein yieG n=411 Tax=Enterobacteriaceae RepID=E2QHQ3_ECOLX
purP; putative adenine permease PurP
Uncharacterized protein {ECO:0000313|EMBL:CEK07857.1}; TaxID=244319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:H11.;"
L3_060_043G1_scaffold_310_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10192..10857
DNA (666bp) protein (222aa)
Phosphatase YieH n=382 Tax=Enterobacteriaceae RepID=A7ZTS0_ECO24
yieH; 6-phosphogluconate phosphatase
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:ESD16546.1}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
L3_060_043G1_scaffold_310_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10924..11397
DNA (474bp) protein (158aa)
Inner membrane protein CbrB n=155 Tax=Enterobacteriaceae RepID=CBRB_ECOHS
putative inner membrane protein
Putative inner membrane protein CbrB {ECO:0000313|EMBL:EFK44255.1}; TaxID=679206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 119-7.;"
L3_060_043G1_scaffold_310_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11446..11619
DNA (174bp) protein (58aa)
Putative uncharacterized protein n=1 Tax=Escherichia coli O104:H4 str. 01-09591 RepID=F9CPC5_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESD70244.1}; TaxID=1268996 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908541.;"
L3_060_043G1_scaffold_310_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11752..12033
DNA (282bp) protein (94aa)
Uncharacterized protein n=13 Tax=Escherichia coli RepID=A7ZTS2_ECO24
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDX23151.1}; TaxID=1444231 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-156-04_S4_C2.;"
L3_060_043G1_scaffold_310_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12095..12817)
DNA (723bp) protein (241aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|SAAS:SAAS00029496};; TaxID=1446704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O174:H8 str. 04-3038.;"
Uncharacterized protein YieK n=369 Tax=Enterobacteriaceae RepID=YIEK_ECOLI
yieK; putative 6-phosphogluconolactonase
L3_060_043G1_scaffold_310_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12832..14001)
DNA (1170bp) protein (390aa)
Predicted xylanase n=232 Tax=Enterobacteriaceae RepID=E3PNR8_ECOH1
xylanase
Isoamylase N-terminal domain protein {ECO:0000313|EMBL:EFU34561.1}; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 85-1.;"
L3_060_043G1_scaffold_310_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14028..15644)
DNA (1617bp) protein (539aa)
Carbohydrate-specific outer membrane porin, cryptic n=40 Tax=Escherichia coli RepID=M4JT01_ECOLX
Cryptic outer membrane porin BglH {ECO:0000313|EMBL:EOV53131.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
carbohydrate-specific outer membrane porin, cryptic
L3_060_043G1_scaffold_310_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15730..17124)
DNA (1395bp) protein (465aa)
6-phospho-beta-glucosidase BglB n=2 Tax=Escherichia coli RepID=L2VGJ2_ECOLX
6-phospho-beta-glucosidase BglB {ECO:0000313|EMBL:ELC13570.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
6-phospho-beta-glucosidase
L3_060_043G1_scaffold_310_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17143..19020)
DNA (1878bp) protein (626aa)
PTS system beta-glucoside-specific eiibca component n=2 Tax=Escherichia coli RepID=L2VDJ3_ECOLX
PTS system beta-glucoside-specific eiibca component {ECO:0000313|EMBL:ELC13571.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
bglF; bglF, subunit of EIIBgl
L3_060_043G1_scaffold_310_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19154..19990)
DNA (837bp) protein (279aa)
Cryptic beta-glucoside bgl operon antiterminator n=2 Tax=Escherichia coli RepID=L2VG98_ECOLX
Cryptic beta-glucoside bgl operon antiterminator {ECO:0000313|EMBL:ESK17668.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
cryptic beta-glucoside bgl operon antiterminator
L3_060_043G1_scaffold_310_20
Escherichia fergusonii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20276..20482)
DNA (207bp) protein (69aa)
Phosphate-specific transport system accessory protein PhoU n=4 Tax=Escherichia coli RepID=E9VEQ6_ECOLX
phoU; transcriptional regulator PhoU
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=585054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73).;"
Displaying 20 items

View Taxonomy